RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 OTUB2Q96DC9 234 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 PCMTD1Q96MG8 357 aaPredicted RBP19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 ERGIC2Q96RQ1 377 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 CBX8Q9HC52 389 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 ABCC13Q9NSE7 274 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 RBM12Q9NTZ6 932 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 MARCH2Q9P0N8 246 aa19.62■□□□□ 0.73
PRPF40B-206ENST00000547764 H0Y858 1186 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 STC2O76061 302 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 CYP11B1P15538 503 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 GALK1P51570 392 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 COG7P83436 770 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 PDCLQ13371 301 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 ANGPT1Q15389 498 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 GAB4Q2WGN9 574 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 TMEM196Q5HYL7 178 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 TMEM110Q86TL2 294 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 C1orf210Q8IVY1 113 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 RNF139Q8WU17 664 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 P2RY13Q9BPV8 354 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 LHX5Q9H2C1 402 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 CHRDQ9H2X0 955 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 FBRSL1Q9HCM7 1045 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 NLRC4Q9NPP4 1024 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 OLA1Q9NTK5 396 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 SPATA6Q9NWH7 488 aaPredicted RBP19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 LSM7Q9UK45 103 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 STRIP2Q9ULQ0 834 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 CACNA1HO95180 2353 aa19.61■□□□□ 0.73
PRPF40B-206ENST00000547764 SLC12A8A0AV02 714 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 E5RJQ4 531 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 LTFP02788 710 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 HMBSP08397 361 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 GRSF1Q12849 480 aaKnown RBP eCLIP19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 CCINQ13939 588 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 LRRC32Q14392 662 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 DGKKQ5KSL6 1271 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 LY6G5CQ5SRR4 150 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 FSTL4Q6MZW2 842 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 NEK11Q8NG66 645 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 TJP2Q9UDY2 1190 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 SFMBT1Q9UHJ3 866 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 DAAM1Q9Y4D1 1078 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 CACNA1IQ9P0X4 2223 aa19.6■□□□□ 0.73
PRPF40B-206ENST00000547764 TEX33O43247 280 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 PAPSS1O43252 624 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 ADH1CP00326 375 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 KLKB1P03952 638 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 OPRD1P41143 372 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 JAM2P57087 298 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 MTAPQ13126 283 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 Q6ZNB5 142 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 LUZP1Q86V48 1076 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 FMNL3Q8IVF7 1028 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 C1orf131Q8NDD1 294 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 DDX1Q92499 740 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 GOLGA1Q92805 767 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 CD101Q93033 1021 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 EXOC4Q96A65 974 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 CPXM1Q96SM3 734 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 RTN4Q9NQC3 1192 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 MYOFQ9NZM1 2061 aa19.59■□□□□ 0.73
PRPF40B-206ENST00000547764 SART1O43290 800 aaKnown RBP19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 GFPT2O94808 682 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 EGFP01133 1207 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 FYNP06241 537 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 ADH5P11766 374 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 SOX5P35711 763 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 GAS6Q14393 721 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 TAF3Q5VWG9 929 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 MSANTD2Q6P1R3 559 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 Q6ZS52 159 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 NOP9Q86U38 636 aaKnown RBP19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 TMEM25Q86YD3 366 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 MAML2Q8IZL2 1156 aaPredicted RBP19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 FAM149B1Q96BN6 582 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 PPP1R13BQ96KQ4 1090 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 SPAG5Q96R06 1193 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 PDCL3Q9H2J4 239 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 SPHK2Q9NRA0 654 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 CEP83Q9Y592 693 aa19.58■□□□□ 0.72
PRPF40B-206ENST00000547764 LAMTOR5O43504 91 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 CAVIN2O95810 425 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 DRD1P21728 446 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 CORO1AP31146 461 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 SLC6A11P48066 632 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 NHLH1Q02575 133 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 GAD2Q05329 585 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 SYNPOQ8N3V7 929 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 EPS8L1Q8TE68 723 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 PLD4Q96BZ4 506 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 NOX5Q96PH1 765 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 IER2Q9BTL4 223 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 DCLK3Q9C098 648 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 IRF2BPLQ9H1B7 796 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 ZNF510Q9Y2H8 683 aa19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 HBS1LQ9Y450 684 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-206ENST00000547764 HOXC11O43248 304 aaPredicted RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 MSI1O43347 362 aaKnown RBP19.56■□□□□ 0.72
PRPF40B-206ENST00000547764 NCAM1P13591 858 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms