RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 CCDC92Q53HC0 331 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PLEKHA7Q6IQ23 1121 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ZCCHC23Q6ZST2 131 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SLC26A11Q86WA9 606 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 CTAGE3PQ8IX95 158 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 RSAD2Q8WXG1 361 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 LRGUKQ96M69 825 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 TMEM39BQ9GZU3 492 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 HEMK1Q9Y5R4 338 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 MYH9P35579 1960 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ASTN2O75129 1339 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 WDR90Q96KV7 1748 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 SNRPAP09012 282 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 DYNLT1P63172 113 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 GCNT1Q02742 428 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 GSTM4Q03013 218 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PACS1Q6VY07 963 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ENOSF1Q7L5Y1 443 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 HAUS6Q7Z4H7 955 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PPP1R14CQ8TAE6 165 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 RAB3IL1Q8TBN0 382 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 POMGNT1Q8WZA1 660 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PLGRKTQ9HBL7 147 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 XAB2Q9HCS7 855 aaKnown RBP11.08□□□□□ -0.64
NPAS3-205ENST00000547068 THAP1Q9NVV9 213 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 RRN3Q9NYV6 651 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ZNF180Q9UJW8 692 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 PPP2R3BQ9Y5P8 575 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 ZNF536O15090 1300 aa11.08□□□□□ -0.64
NPAS3-205ENST00000547068 A0A0B4J269 797 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 LOC100653049A0A140TA62 436 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 KANSL1LA0AUZ9 987 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SIN3BO75182 1162 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 KRT34O76011 436 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 COL2A1P02458 1487 aaPredicted RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CFHP08603 1231 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 MAPTP10636 758 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 RBP3P10745 1247 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 ITGAXP20702 1163 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SHMT1P34896 483 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 STT3AP46977 705 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 NAA20P61599 178 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 RPL7AP62424 266 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CNTNAP1P78357 1384 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 IKQ13123 557 aaPredicted RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 TUBB3Q13509 450 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SLFN13Q68D06 897 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 POTEHQ6S545 545 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 AMIGO2Q86SJ2 522 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CMTM5Q96DZ9 223 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CORO1BQ9BR76 489 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 LIN28AQ9H9Z2 209 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 PARVAQ9NVD7 372 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 HERC5Q9UII4 1024 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SCAF8Q9UPN6 1271 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 GNEQ9Y223 722 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 ITM2AO43736 263 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CBFA2T3O75081 653 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 ZNF24P17028 368 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CDKN2BP42772 138 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 OTUD4Q01804 1114 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 C16orf72Q14CZ0 275 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 TXNRD3NBQ6F5E7 133 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 TRIML2Q8N7C3 387 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 CATSPER1Q8NEC5 780 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 PIWIL2Q8TC59 973 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 ACTL9Q8TC94 416 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 GIPC3Q8TF64 312 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 VCPIP1Q96JH7 1222 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 KCNK16Q96T55 309 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 MAF1Q9H063 256 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 UNC45AQ9H3U1 944 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 IFT122Q9HBG6 1241 aa11.07□□□□□ -0.64
NPAS3-205ENST00000547068 POLR2AP24928 1970 aaKnown RBP11.07□□□□□ -0.64
NPAS3-205ENST00000547068 SLC16A4O15374 487 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 TOM1L1O75674 476 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 BPGMP07738 259 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 GJA8P48165 433 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 ENTPD1P49961 510 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 NOMO3P69849 1222 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 GTF2BQ00403 316 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 PEX6Q13608 980 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 LGSNQ5TDP6 509 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 DCAF4Q8WV16 495 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 BIRC8Q96P09 236 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 TRIM56Q9BRZ2 755 aaKnown RBP11.06□□□□□ -0.64
NPAS3-205ENST00000547068 HAUS8Q9BT25 410 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 NRDE2Q9H7Z3 1164 aa11.06□□□□□ -0.64
NPAS3-205ENST00000547068 ZNHIT2Q9UHR6 403 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms