RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RFPL2O75678 378 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 ENDOD1O94919 500 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 FTCDO95954 541 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 HOXB8P17481 243 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 SSR1P43307 286 aaKnown RBP16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 EPHA5P54756 1037 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 ATP11AP98196 1134 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 DEUP1Q05D60 604 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 ZNF252P-AS1Q0IIN9 211 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 HYAL1Q12794 435 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 NNTQ13423 1086 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 GRIN2CQ14957 1233 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 RPS6KA1Q15418 735 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 MEI1Q5TIA1 1274 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 LRRC38Q5VT99 294 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 SYPL2Q5VXT5 272 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 TRNP1Q6NT89 227 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 CC2D1AQ6P1N0 951 aaPredicted RBP16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 RHOT1Q8IXI2 618 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 MRPS31Q92665 395 aaKnown RBP16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 CORO1BQ9BR76 489 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 PIDD1Q9HB75 910 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 DNAI1Q9UI46 699 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 USTQ9Y2C2 406 aa16.52■□□□□ 0.24
TRAFD1-203ENST00000547063 CLUHO75153 1309 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 PSTPIP1O43586 416 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 PRPSAP2O60256 369 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 TLR5O60602 858 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 LRCH4O75427 683 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 TRUB2O95900 331 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 F11P03951 625 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 KRT7P08729 469 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 SLC2A3P11169 496 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 DDX6P26196 483 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 GABRR2P28476 465 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 ATP5C1P36542 298 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 AIF1P55008 147 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 MTA1Q13330 715 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 CDO1Q16878 200 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 C15orf59Q2T9L4 293 aaPredicted RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 ARHGAP15Q53QZ3 475 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 C10orf120Q5SQS8 335 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 PDZD4Q76G19 769 aaPredicted RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 BNIPLQ7Z465 357 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 POLNQ7Z5Q5 900 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 TMC8Q8IU68 726 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 KIF18AQ8NI77 898 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 DQX1Q8TE96 717 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 SMG7Q92540 1137 aaKnown RBP16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 WDR24Q96S15 920 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 TBCBQ99426 244 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 LRRC3Q9BY71 257 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 NACA2Q9H009 215 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 DDIT4Q9NX09 232 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 OSER1Q9NX31 292 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 DNMT3LQ9UJW3 386 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 MTCH2Q9Y6C9 303 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 CHD9Q3L8U1 2897 aa16.51■□□□□ 0.23
TRAFD1-203ENST00000547063 MYL4P12829 197 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 CTNNA2P26232 953 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 HOXD11P31277 338 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 CTNNA1P35221 906 aaKnown RBP16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 ADAM15Q13444 863 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 ARL13BQ3SXY8 428 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 BOLA3Q53S33 107 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 HES6Q96HZ4 224 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 GOLPH3Q9H4A6 298 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 IL21Q9HBE4 155 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 ZNF334Q9HCZ1 680 aaPredicted RBP16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 MARCH2Q9P0N8 246 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 USP18Q9UMW8 372 aa16.5■□□□□ 0.23
TRAFD1-203ENST00000547063 SOX1O00570 391 aaPredicted RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 IRAK2O43187 625 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 IGLV3-25P01717 112 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 RHOP08100 348 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 PRLRP16471 622 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 IGFBP4P22692 258 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 MIPP30301 263 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 RANBP2P49792 3224 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 HDAC4P56524 1084 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 COG7P83436 770 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 NME3Q13232 169 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 ODF2Q5BJF6 829 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 BRMS1LQ5PSV4 323 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 DNTTIP2Q5QJE6 756 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 ANKRD54Q6NXT1 300 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 SCYL2Q6P3W7 929 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 GAREM2Q75VX8 874 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 TAC4Q86UU9 113 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 PSTKQ8IV42 348 aaKnown RBP16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 VN1R2Q8NFZ6 395 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 TEKT4Q8WW24 435 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 CD101Q93033 1021 aa16.49■□□□□ 0.23
TRAFD1-203ENST00000547063 RNF34Q969K3 372 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms