RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ALYREFQ86V81 257 aaKnown RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 TEX9Q8N6V9 391 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 PDCD6IPQ8WUM4 868 aaKnown RBP10.15□□□□□ -0.79
TRAF1-203ENST00000546084 CDKL2Q92772 493 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 KLRG1Q96E93 195 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 FAM167AQ96KS9 214 aa10.15□□□□□ -0.79
TRAF1-203ENST00000546084 LAMB1P07942 1786 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SCN7AQ01118 1682 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TMEM191CA6NGB0 347 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 BUD23O43709 281 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 DNAJC6O75061 913 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 PMPCBO75439 489 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KRT36O76013 467 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ASS1P00966 412 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ERVK-10P10266 1014 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 NME5P56597 212 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KPNB1Q14974 876 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 PDK4Q16654 411 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KLHL38Q2WGJ6 581 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TNFAIP8L3Q5GJ75 292 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 PPP1R26Q5T8A7 1209 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 PNPLA1Q8N8W4 532 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 REPS2Q8NFH8 660 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MARK4Q96L34 752 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MRIQ9BWK5 157 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TMEM120AQ9BXJ8 343 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 DDX56Q9NY93 547 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 AK5Q9Y6K8 562 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 RPS6KL1Q9Y6S9 549 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 hCG_1818297A0A087WSY0 165 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 E9PBE3 544 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KLHL41O60662 606 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 CXCR3P49682 368 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 C1QBPQ07021 282 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MYBPC2Q14324 1141 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 CA9Q16790 459 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 RABGAP1LQ5R372 815 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ANO7Q6IWH7 933 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KCNT2Q6UVM3 1135 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 RIBC1Q8N443 379 aaPredicted RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ZCCHC9Q8N567 271 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 C1orf127Q8N9H9 656 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ACO2Q99798 780 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ELOVL4Q9GZR5 314 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 C17orf75Q9HAS0 396 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SENP1Q9P0U3 644 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SNX10Q9Y5X0 201 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MAP3K7O43318 606 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KRT38O76015 456 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MTA2O94776 668 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TMEM63AO94886 807 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 GSTA2P09210 222 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 GM2AP17900 193 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 KCNA3P22001 575 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 VHLP40337 213 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 PLIN5Q00G26 463 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ADIGQ0VDE8 80 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 CUL3Q13618 768 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 DPYSL3Q14195 570 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 RNF220Q5VTB9 566 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 OR6P1Q8NGX9 317 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 C7orf43Q8WVR3 580 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SCG3Q8WXD2 468 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 DDX1Q92499 740 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 ZFP42Q96MM3 310 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MRPL45Q9BRJ2 306 aaKnown RBP10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TIPINQ9BVW5 301 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 DPEP3Q9H4B8 488 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 CYP4F12Q9HCS2 524 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 SLC39A10Q9ULF5 831 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 MFHAS1Q9Y4C4 1052 aa10.14□□□□□ -0.79
TRAF1-203ENST00000546084 TFE3P19532 575 aaPredicted RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ATP6V1C1P21283 382 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 ETFBP38117 255 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 PAPOLAP51003 745 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 PLK1P53350 603 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 PARP6Q2NL67 630 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 TRMT10BQ6PF06 316 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 RASSF3Q86WH2 238 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 WDR49Q8IV35 697 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 IPMKQ8NFU5 416 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 INPP5DQ92835 1189 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 LPPQ93052 612 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 AZIN2Q96A70 460 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 NXF3Q9H4D5 531 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 GTSE1Q9NYZ3 720 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 UBAP1Q9NZ09 502 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 TUBGCP4Q9UGJ1 667 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 URB1O60287 2271 aaKnown RBP10.13□□□□□ -0.79
TRAF1-203ENST00000546084 NAV1Q8NEY1 1877 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 hCG_2014768A0A024R1R8 64 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 CCL15-CCL14A0A0B4J2E2 113 aa10.13□□□□□ -0.79
TRAF1-203ENST00000546084 M0QZ92 97 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms