RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 GDE1Q9NZC3 331 aa17.04■□□□□ 0.32
LIMS2-217ENST00000545738 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 EPN1Q9Y6I3 576 aaPredicted RBP17.04■□□□□ 0.32
LIMS2-217ENST00000545738 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
LIMS2-217ENST00000545738 HSF2BPO75031 334 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 PSEN1P49768 467 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF252P-AS1Q0IIN9 211 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 EFEMP1Q12805 493 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 SH3PXD2AQ5TCZ1 1133 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 TANGO2Q6ICL3 276 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 TAC4Q86UU9 113 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 DQX1Q8TE96 717 aaKnown RBP17.03■□□□□ 0.32
LIMS2-217ENST00000545738 RSAD2Q8WXG1 361 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 ASB2Q96Q27 587 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 PLA2G2FQ9BZM2 168 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 ABCC13Q9NSE7 274 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 ASNSD1Q9NWL6 643 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 MYO1AQ9UBC5 1043 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 STRIP2Q9ULQ0 834 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 USTQ9Y2C2 406 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 CPQQ9Y646 472 aa17.03■□□□□ 0.32
LIMS2-217ENST00000545738 KIF26AQ9ULI4 1882 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 C2CD4BA6NLJ0 364 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 SART1O43290 800 aaKnown RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 GREM1O60565 184 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 DAB1O75553 588 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 IGLV3-25P01717 112 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 CKMP06732 381 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 SCNN1AP37088 669 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 ATXN1P54253 815 aaKnown RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 SLC7A9P82251 487 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 ZP2Q05996 745 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 EIF4EBP2Q13542 120 aaPredicted RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 ARHGAP15Q53QZ3 475 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 DCAF6Q58WW2 860 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 EFHC1Q5JVL4 640 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 MSANTD2Q6P1R3 559 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 MIB1Q86YT6 1006 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 ZNF276Q8N554 614 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 MSANTD4Q8NCY6 345 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 CFAP57Q96MR6 1250 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 MCEEQ96PE7 176 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 PPP1R9BQ96SB3 815 aa17.02■□□□□ 0.32
LIMS2-217ENST00000545738 EIF3CQ99613 913 aaKnown RBP17.02■□□□□ 0.32
LIMS2-217ENST00000545738 TRAV19A0A0A6YYK7 116 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ANKRD62A6NC57 917 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 GOLGA6L6A8MZA4 724 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 LOC730098B7Z3J9 87 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 CYP1A2P05177 515 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 GLI1P08151 1106 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 MBL2P11226 248 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 KRT3P12035 628 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 DDX6P26196 483 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 C15orf59Q2T9L4 293 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 DNAJC24Q6P3W2 148 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 KLHDC10Q6PID8 442 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ARHGAP18Q8N392 663 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ATXN2LQ8WWM7 1075 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 SMARCD2Q92925 531 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 NT5C3BQ969T7 300 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 KXD1Q9BQD3 176 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 KLF16Q9BXK1 252 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 SIGLEC16A6NMB1 481 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 RALAP11233 206 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ATP5C1P36542 298 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 AVPR1AP37288 418 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 MATKP42679 507 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 HTR4Q13639 388 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 PUS10Q3MIT2 529 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 CCDC14Q49A88 953 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 BEND5Q7L4P6 421 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 OTOP3Q7RTS5 596 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 BNIPLQ7Z465 357 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 TDRD5Q8NAT2 981 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 RXFP2Q8WXD0 754 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 BTBD6Q96KE9 485 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 NECAB3Q96P71 396 aaPredicted RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 NPY6RQ99463 290 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 DDX23Q9BUQ8 820 aaKnown RBP17.01■□□□□ 0.31
LIMS2-217ENST00000545738 SELENOOQ9BVL4 669 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 SMOC2Q9H3U7 446 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 TRPV4Q9HBA0 871 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 CD320Q9NPF0 282 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 OSGEPQ9NPF4 335 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 MARCH2Q9P0N8 246 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 SALL4Q9UJQ4 1053 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ARHGAP26Q9UNA1 814 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 PCDHA13Q9Y5I0 950 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
LIMS2-217ENST00000545738 ANHXE9PGG2 379 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms