RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 TLR5O60602 858 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 TULP3O75386 442 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 ALDH1A2O94788 518 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 KCNK5O95279 499 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 P4HA1P13674 534 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 PMLP29590 882 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 P2RY2P41231 377 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 PIK3CAP42336 1068 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 SYKP43405 635 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 GCLMP48507 274 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 DHPSP49366 369 aaPredicted RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 VAMP7P51809 220 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 NDUFA8P51970 172 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 IRX4P78413 519 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 PPP3CAQ08209 521 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 ANO4Q32M45 955 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 HSF5Q4G112 596 aaPredicted RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 EOGTQ5NDL2 527 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 BTBD8Q5XKL5 378 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 CLEC20AQ6ZU45 233 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 HTR3DQ70Z44 454 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 C11orf74Q86VG3 221 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 ABCA7Q8IZY2 2146 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 TAS1R2Q8TE23 839 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 WHAMMQ8TF30 809 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 CYFIP2Q96F07 1278 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 HNRNPABQ99729 332 aaKnown RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 DUSP9Q99956 384 aaKnown RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 NACA2Q9H009 215 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 FBXO44Q9H4M3 255 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 TLR8Q9NR97 1041 aaKnown RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 DEC1Q9P2X7 70 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 MBD1Q9UIS9 605 aaPredicted RBP8.94□□□□□ -0.98
USP28-215ENST00000545608 MAPK8IP1Q9UQF2 711 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 FRMD4BQ9Y2L6 1034 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 SPAG17Q6Q759 2223 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 ACACBO00763 2458 aa8.94□□□□□ -0.98
USP28-215ENST00000545608 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 FAM237AA0A1B0GTK4 181 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 TCRBV21S2A2A0A5A6 115 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 LNP1A1A4G5 178 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 CDX4O14627 284 aaPredicted RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 GIPC1O14908 333 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 KHNYNO15037 678 aaKnown RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 MDM4O15151 490 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MAPK13O15264 365 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 RHOBTB3O94955 611 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MYL1P05976 194 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 FAM200BP0CF97 657 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 TRIM49P0CI25 452 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 TRIM49CP0CI26 452 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 ACO1P21399 889 aaKnown RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 ATP5C1P36542 298 aaKnown RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 WASP42768 502 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 INCA1Q0VD86 236 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 DPYDQ12882 1025 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 NFIL3Q16649 462 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MAP7D1Q3KQU3 841 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 ARMCX6Q7L4S7 300 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MIB1Q86YT6 1006 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 TMEFF1Q8IYR6 380 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 PGBD3Q8N328 593 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 TERB1Q8NA31 727 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 HMGB4Q8WW32 186 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 PIGKQ92643 395 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 JAKMIP2Q96AA8 810 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 SPATA32Q96LK8 384 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 NT5C1AQ9BXI3 368 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MMRN2Q9H8L6 949 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 NMUR1Q9HB89 426 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 POLMQ9NP87 494 aaPredicted RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 BCCIPQ9P287 314 aaKnown RBP eCLIP8.93□□□□□ -0.98
USP28-215ENST00000545608 TSR3Q9UJK0 312 aaKnown RBP8.93□□□□□ -0.98
USP28-215ENST00000545608 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 SCML2Q9UQR0 700 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 CACNA1BQ00975 2339 aa8.93□□□□□ -0.98
USP28-215ENST00000545608 MYOFQ9NZM1 2061 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 HELZP42694 1942 aaKnown RBP8.92□□□□□ -0.98
USP28-215ENST00000545608 MYO16Q9Y6X6 1858 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 A0A1W2PQH9 124 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 CYP26A1O43174 497 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 CILPO75339 1184 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 RARGP13631 454 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 GABRG2P18507 467 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 CD58P19256 250 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 NR2F2P24468 414 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 PTGER3P43115 390 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 KIF11P52732 1056 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 KRT85P78386 507 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 ADAM9Q13443 819 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 ST3GAL2Q16842 350 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 C10orf76Q5T2E6 689 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 EGFLAMQ63HQ2 1017 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 PSAPL1Q6NUJ1 521 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 BRICD5Q6PL45 260 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 KRBA2Q6ZNG9 492 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
USP28-215ENST00000545608 TOGARAM2Q6ZUX3 1019 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms