RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 VCPIP1Q96JH7 1222 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ZFYVE19Q96K21 471 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 KREMEN1Q96MU8 473 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 TSGA10Q9BZW7 698 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ATXN3LQ9H3M9 355 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 SPTLC3Q9NUV7 552 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 C2orf42Q9NWW7 574 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 GTSE1Q9NYZ3 720 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 ARHGAP20Q9P2F6 1191 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 MYO1AQ9UBC5 1043 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 LCMT1Q9UIC8 334 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 SLC27A5Q9Y2P5 690 aa6.95□□□□□ -1.3
CDCA3-209ENST00000544610 EPN1Q9Y6I3 576 aaPredicted RBP6.95□□□□□ -1.3
CDCA3-209ENST00000544610 NUP210Q8TEM1 1887 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 A0A0A6YYK5 440 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CCDC163A0A0D9SF12 145 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 KPNA7A9QM74 516 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 RNF225M0QZC1 329 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 FOXN3O00409 490 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 GABRDO14764 452 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 PPEF2O14830 753 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 MED7O43513 233 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 GDF9O60383 454 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CILPO75339 1184 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 SOAT2O75908 522 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CYP11A1P05108 521 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ATF6P18850 670 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 MSNP26038 577 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 GABRR2P28476 465 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 HOXC13P31276 330 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ASPAP45381 313 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 LHX1P48742 406 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 KLK7P49862 253 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 PDE6CP51160 858 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 GUCY2FP51841 1108 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 LIMK1P53667 647 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 LILRA4P59901 499 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TNNC1P63316 161 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CDR2Q01850 454 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TNK2Q07912 1038 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 SMARCB1Q12824 385 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 RAPGEF1Q13905 1077 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 PON2Q15165 354 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 SPA17Q15506 151 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ST3GAL2Q16842 350 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 WDR72Q3MJ13 1102 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ARHGAP15Q53QZ3 475 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 HEATR6Q6AI08 1181 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ITIH5Q86UX2 942 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CRYBG2Q8N1P7 616 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 RNF10Q8N5U6 811 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 OR10T2Q8NGX3 314 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 SLC30A5Q8TAD4 765 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TTC8Q8TAM2 541 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 BPIFB1Q8TDL5 484 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CPLX3Q8WVH0 158 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 DDX1Q92499 740 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TNIP3Q96KP6 325 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 SENP8Q96LD8 212 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM209Q96SK2 561 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 LPIN3Q9BQK8 851 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 MIS12Q9H081 205 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 ZCWPW1Q9H0M4 648 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 LHX5Q9H2C1 402 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 HAUS4Q9H6D7 363 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TASP1Q9H6P5 420 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 NHEJ1Q9H9Q4 299 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 IL21Q9HBE4 155 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 APOBEC3GQ9HC16 384 aaKnown RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 NLRC4Q9NPP4 1024 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CYLDQ9NQC7 956 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CISHQ9NSE2 258 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 TMEM51Q9NW97 253 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 NENFQ9UMX5 172 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 AGAP1Q9UPQ3 857 aa6.94□□□□□ -1.3
CDCA3-209ENST00000544610 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 KIF26AQ9ULI4 1882 aaPredicted RBP6.94□□□□□ -1.3
CDCA3-209ENST00000544610 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 GOLGA8CPA6NN73 597 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 ESPNB1AK53 854 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 PJA2O43164 708 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 KRT86O43790 486 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 AKR1B10O60218 316 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 HUS1O60921 280 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 KRT19P08727 400 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 MYBL1P10243 752 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CYP11B1P15538 503 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 WARSP23381 471 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CDC25CP30307 473 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CDH5P33151 784 aaPredicted RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 TUFMP49411 452 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 KIF11P52732 1056 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 HADHBP55084 474 aaKnown RBP6.93□□□□□ -1.3
CDCA3-209ENST00000544610 SNX16P57768 344 aa6.93□□□□□ -1.3
CDCA3-209ENST00000544610 CYP4F8P98187 520 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms