RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 NOS2P35228 1153 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 ARL4AP40617 200 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 NR1H3Q13133 447 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 NOGQ13253 232 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 ITGA7Q13683 1181 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 PPP1R21Q6ZMI0 780 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 MICALCLQ6ZW33 695 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 FAM131BQ86XD5 332 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 CYP4X1Q8N118 509 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 PGBD4Q96DM1 585 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 RTP4Q96DX8 246 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 CSPG4P5Q96PW8 444 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 ADAM2Q99965 735 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 KCNK9Q9NPC2 374 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 RNF186Q9NXI6 227 aa17.73■□□□□ 0.43
PTPRO-209ENST00000543886 A0A0U1RQF3 1178 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 E7ESA3 106 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 POC1B-GALNT4F8VUJ3 575 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 MAP3K6O95382 1288 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 POMCP01189 267 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 BRAFP15056 766 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 RBL1P28749 1068 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 NDUFV1P49821 464 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 DSC3Q14574 896 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 BBS9Q3SYG4 887 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 CPLX4Q7Z7G2 160 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 RNF180Q86T96 592 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 METTL23Q86XA0 190 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 PCED1BQ96HM7 432 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 PRMT1Q99873 361 aaKnown RBP17.72■□□□□ 0.43
PTPRO-209ENST00000543886 PAAF1Q9BRP4 392 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 TRMT13Q9NUP7 481 aaKnown RBP17.72■□□□□ 0.43
PTPRO-209ENST00000543886 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 FZD10Q9ULW2 581 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 PTCH2Q9Y6C5 1203 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 THSD7BQ9C0I4 1608 aa17.72■□□□□ 0.43
PTPRO-209ENST00000543886 MYBPHLA2RUH7 354 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 CHADO15335 359 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 TOMM70O94826 608 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SKIP12755 728 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 NR2C2P49116 596 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 CAP1Q01518 475 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 MSS51Q4VC12 460 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 TIGD5Q53EQ6 642 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 TADA2BQ86TJ2 420 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 TDRPQ86YL5 185 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 PSTKQ8IV42 348 aaKnown RBP17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SRRM1Q8IYB3 904 aaKnown RBP17.71■□□□□ 0.43
PTPRO-209ENST00000543886 DYDC1Q8WWB3 177 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 POPDC2Q9HBU9 364 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 UBN1Q9NPG3 1134 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 RAB6BQ9NRW1 208 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 EURLQ9NYK6 297 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 ACTL7BQ9Y614 415 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SYNJ2BP-COX16A0A087WUM0 186 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 M0QYT0 321 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 CABYRO75952 493 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 MAGEA9P43362 315 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 GRIK3Q13003 919 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 XRCC4Q13426 336 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 KCNJ11Q14654 390 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 VSTM1Q6UX27 236 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 PALM2Q8IXS6 379 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 FBXO36Q8NEA4 188 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 MGARPQ8TDB4 240 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 NPY6RQ99463 290 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 SMOQ99835 787 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 ULBP1Q9BZM6 244 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 KLC2Q9H0B6 622 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 COX16Q9P0S2 106 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 RCOR3Q9P2K3 495 aaPredicted RBP17.71■□□□□ 0.43
PTPRO-209ENST00000543886 INPP5FQ9Y2H2 1132 aa17.71■□□□□ 0.43
PTPRO-209ENST00000543886 TDRD15B5MCY1 1934 aaKnown RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 CLUHO75153 1309 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 FOXO6A8MYZ6 492 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 RASA4BC9J798 803 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 CAPN9O14815 690 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 RASA4O43374 803 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 AOC2O75106 756 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 B3GAT3O94766 335 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 CREB1P16220 341 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 ATP2A2P16615 1042 aaKnown RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 IFNAR2P48551 515 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 GPX6P59796 221 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 GBE1Q04446 702 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 SLC45A4Q5BKX6 768 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 C4orf22Q6V702 233 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 ANKRD42Q8N9B4 389 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 NT5C3BQ969T7 300 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 MAGEB5Q9BZ81 275 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 CCDC134Q9H6E4 229 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 SLC24A2Q9UI40 661 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 ZMYND8Q9ULU4 1186 aaPredicted RBP17.7■□□□□ 0.42
PTPRO-209ENST00000543886 FAM169AQ9Y6X4 670 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 I3L4J1 428 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 GOT1P17174 413 aa17.7■□□□□ 0.42
PTPRO-209ENST00000543886 GCAP28676 217 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms