RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CYP2F1P24903 491 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 ACADSBP45954 432 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 PRKCZQ05513 592 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 CBLBQ13191 982 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 SV2CQ496J9 727 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 CD99L2Q8TCZ2 262 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 SLC2A14Q8TDB8 520 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 GRAMD1AQ96CP6 724 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 NRDE2Q9H7Z3 1164 aa14.46□□□□□ -0.09
MSH2-206ENST00000543555 MAP3K6O95382 1288 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 KRT4P19013 534 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 L1CAMP32004 1257 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 MSH2P43246 934 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 FLT3LGP49771 235 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 CRYBB1P53674 252 aaPredicted RBP14.46□□□□□ -0.1
MSH2-206ENST00000543555 ATXN1P54253 815 aaKnown RBP14.46□□□□□ -0.1
MSH2-206ENST00000543555 FAM182AQ5T1J6 154 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 SYCP2LQ5T4T6 812 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 MZB1Q8WU39 189 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 DCAKDQ8WVC6 231 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 PLCD4Q9BRC7 762 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 DNAI2Q9GZS0 605 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 DHX35Q9H5Z1 703 aaKnown RBP14.46□□□□□ -0.1
MSH2-206ENST00000543555 IPPQ9Y573 584 aa14.46□□□□□ -0.1
MSH2-206ENST00000543555 KBTBD13C9JR72 458 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 BEX3Q00994 111 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 XRCC4Q13426 336 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 SLC1A5Q15758 541 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 RGS9BPQ6ZS82 235 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 ADGRF2Q8IZF7 708 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 HSFY1Q96LI6 401 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 CYTH2Q99418 400 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 PITPNM3Q9BZ71 974 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 TMEM51Q9NW97 253 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 GRID1Q9ULK0 1009 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 AP4E1Q9UPM8 1137 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 ARRDC4Q8NCT1 418 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 SMG8Q8ND04 991 aaKnown RBP14.45□□□□□ -0.1
MSH2-206ENST00000543555 FRMD8Q9BZ67 464 aaPredicted RBP14.45□□□□□ -0.1
MSH2-206ENST00000543555 AP5M1Q9H0R1 490 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 HAUS2Q9NVX0 235 aa14.45□□□□□ -0.1
MSH2-206ENST00000543555 TCRBV9S1A1TA0A576 114 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 C17orf102A2RUQ5 167 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 HUS1O60921 280 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 PDK4Q16654 411 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 FAM133BQ5BKY9 247 aaKnown RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 FAM47EQ6ZV65 393 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 CDKL3Q8IVW4 592 aaPredicted RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 HHIPL1Q96JK4 782 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 TNIP3Q96KP6 325 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 KLC2Q9H0B6 622 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 ETNK2Q9NVF9 386 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 MTMR10Q9NXD2 777 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 GGT7Q9UJ14 662 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 AVILO75366 819 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 SPAG6O75602 509 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 UBOX5O94941 541 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 ZWINTO95229 277 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 TKTP29401 623 aaKnown RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 GBP2P32456 591 aaPredicted RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 LILRA4P59901 499 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 FAXCQ5TGI0 409 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 OSTM1Q86WC4 334 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 AGGF1Q8N302 714 aaeCLIP14.44□□□□□ -0.1
MSH2-206ENST00000543555 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.44□□□□□ -0.1
MSH2-206ENST00000543555 XPO1O14980 1071 aaKnown RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 ZFXP17010 805 aaPredicted RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 MAGEA6P43360 314 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 YWHAZP63104 245 aaKnown RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 SP3Q02447 781 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 GBE1Q04446 702 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 FUKQ8N0W3 1084 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 NME8Q8N427 588 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 CCDC185Q8N715 623 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 B3GALNT2Q8NCR0 500 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 CCDC110Q8TBZ0 833 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 LRRN4Q8WUT4 740 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 KCTD15Q96SI1 283 aaPredicted RBP14.44□□□□□ -0.1
MSH2-206ENST00000543555 MAGEB5Q9BZ81 275 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 STARD13Q9Y3M8 1113 aa14.44□□□□□ -0.1
MSH2-206ENST00000543555 WARSP23381 471 aaKnown RBP14.43□□□□□ -0.1
MSH2-206ENST00000543555 YWHAGP61981 247 aaKnown RBP eCLIP14.43□□□□□ -0.1
MSH2-206ENST00000543555 SLC10A2Q12908 348 aaPredicted RBP14.43□□□□□ -0.1
MSH2-206ENST00000543555 KBTBD12Q3ZCT8 623 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 GALNTL6Q49A17 601 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 SLC45A4Q5BKX6 768 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 EFHC1Q5JVL4 640 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 HHATQ5VTY9 493 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 STRADAQ7RTN6 431 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 TOP6BLQ8N6T0 577 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 GBP7Q8N8V2 638 aaPredicted RBP14.43□□□□□ -0.1
MSH2-206ENST00000543555 CSPG4P5Q96PW8 444 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 KLC4Q9NSK0 619 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 KLHL14Q9P2G3 628 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 Q9Y3F1 56 aa14.43□□□□□ -0.1
MSH2-206ENST00000543555 HOXC8P31273 242 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms