RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 KHNYNO15037 678 aaKnown RBP13.8□□□□□ -0.2
RTN3-213ENST00000543552 TBX18O95935 607 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 TYRP14679 529 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 NTSR1P30989 418 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 P2RY2P41231 377 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 PPP1R2P41236 205 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 COG7P83436 770 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 MESP2Q0VG99 397 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 E2F5Q15329 346 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
RTN3-213ENST00000543552 HMGB4Q8WW32 186 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 SMARCE1Q969G3 411 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 EDEM2Q9BV94 578 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 ARMCX3Q9UH62 379 aaPredicted RBP13.8□□□□□ -0.2
RTN3-213ENST00000543552 STRIP2Q9ULQ0 834 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 STARD13Q9Y3M8 1113 aa13.8□□□□□ -0.2
RTN3-213ENST00000543552 ACACBO00763 2458 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 PSMA7O14818 248 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 GREM1O60565 184 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 ADAM23O75077 832 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 HOXB2P14652 356 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 TBXAS1P24557 533 aaPredicted RBP13.79□□□□□ -0.2
RTN3-213ENST00000543552 CHKAP35790 457 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 PRCPP42785 496 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
RTN3-213ENST00000543552 PGFP49763 221 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 SLC36A4Q6YBV0 504 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 TPGS1Q6ZTW0 290 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
RTN3-213ENST00000543552 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 SFTPA1Q8IWL2 248 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 CHPFQ8IZ52 775 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 ANKRD52Q8NB46 1076 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 SLC4A11Q8NBS3 891 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 SEMA4DQ92854 862 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 EEF2KMTQ96G04 330 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 TIGD1Q96MW7 591 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 SMOC1Q9H4F8 434 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 NMUR1Q9HB89 426 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 HESX1Q9UBX0 185 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 USP3Q9Y6I4 520 aa13.79□□□□□ -0.2
RTN3-213ENST00000543552 MYOFQ9NZM1 2061 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 CNOT1A5YKK6 2376 aaKnown RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 STC2O76061 302 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 BCKDHBP21953 392 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 HOXD12P35452 270 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 DGKGP49619 791 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 BCAT1P54687 386 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 RAD23BP54727 409 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 CUL2Q13617 745 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 TCEAL6Q6IPX3 200 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 Q6ZNB5 142 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 ZC3H3Q8IXZ2 948 aaKnown RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 TCEAL3Q969E4 200 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 WBP2Q969T9 261 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 OLA1Q9NTK5 396 aaKnown RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 RASAL2Q9UJF2 1139 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
RTN3-213ENST00000543552 TPRP12270 2363 aaKnown RBP13.78□□□□□ -0.2
RTN3-213ENST00000543552 LNP1A1A4G5 178 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 GFRA2O00451 464 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 NPC1O15118 1278 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 MDM4O15151 490 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 AP5Z1O43299 807 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 ZNF217O75362 1048 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 CYBBP04839 570 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 HNRNPLP14866 589 aaKnown RBP eCLIP13.77□□□□□ -0.212e-12■■■□□ 15.2
RTN3-213ENST00000543552 CETN1Q12798 172 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 EFEMP1Q12805 493 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 LMAN2Q12907 356 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 CBWD6Q4V339 395 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 CBWD3Q5JTY5 395 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 CBWD5Q5RIA9 395 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 LYSMD4Q5XG99 296 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 THADAQ6YHU6 1953 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 SCD5Q86SK9 330 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 PIGZQ86VD9 579 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 SPATA20Q8TB22 786 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 PIGKQ92643 395 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.21
RTN3-213ENST00000543552 ARID3AQ99856 593 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
RTN3-213ENST00000543552 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
RTN3-213ENST00000543552 EPG5Q9HCE0 2579 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 TMEM9BQ9NQ34 198 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 MARCH2Q9P0N8 246 aa13.77□□□□□ -0.21
RTN3-213ENST00000543552 EVLQ9UI08 416 aaPredicted RBP13.77□□□□□ -0.21
RTN3-213ENST00000543552 NUDT5Q9UKK9 219 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms