RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 IYDQ6PHW0 289 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TRIM72Q6ZMU5 477 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MAP4K3Q8IVH8 894 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 NDUFAF2Q8N183 169 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 IL31RAQ8NI17 732 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ZNF606Q8WXB4 792 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 HSPH1Q92598 858 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CEP170P1Q96L14 293 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 AGBL1Q96MI9 1066 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CCDC28BQ9BUN5 200 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CCDC106Q9BWC9 280 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 GRIP2Q9C0E4 1043 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC9A2Q9UBY0 812 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 APPL1Q9UKG1 709 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 C15orf38-AP3S2A0A0A6YYH1 394 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CXorf49A8MYA2 514 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 UGT1A9O60656 530 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TMCC1O94876 653 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TOP3BO95985 862 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CLPTM1O96005 669 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ICAM1P05362 532 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CD48P09326 243 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CYP2C8P10632 490 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DESP17661 470 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SNRPFP62306 86 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 C1QBPQ07021 282 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ZNF252P-AS1Q0IIN9 211 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DPYSL3Q14195 570 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SMAD1Q15797 465 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TKFCQ3LXA3 575 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SEZ6Q53EL9 994 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ACBD5Q5T8D3 534 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TDRD10Q5VZ19 366 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 AAGABQ6PD74 315 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ARPINQ7Z6K5 226 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC26A11Q86WA9 606 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PHF13Q86YI8 300 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 HPS6Q86YV9 775 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 WDR75Q8IWA0 830 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DEFB107AQ8IZN7 70 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 KCTD6Q8NC69 237 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SLC35B2Q8TB61 432 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 BSNDQ8WZ55 320 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DGCR14Q96DF8 476 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 VCPIP1Q96JH7 1222 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CAPNS2Q96L46 248 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PHF12Q96QT6 1004 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 C20orf27Q9GZN8 174 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 UGT1A7Q9HAW7 530 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 UGT1A10Q9HAW8 530 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 UGT1A8Q9HAW9 530 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 TMEM165Q9HC07 324 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 APOBEC3GQ9HC16 384 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DDX56Q9NY93 547 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CNTN3Q9P232 1028 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DNAJB4Q9UDY4 337 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 FETUBQ9UGM5 382 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ZNF112Q9UJU3 913 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 APOBEC2Q9Y235 224 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DNAJC16Q9Y2G8 782 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PLLPQ9Y342 182 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MAD1L1Q9Y6D9 718 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SMCHD1A6NHR9 2005 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MYOCOSA0A1B0GUC4 107 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SMIM31A0A1B0GVY4 71 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 H7C0C1 242 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MCF2LO15068 1137 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ADCY3O60266 1144 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ZC3H11AO75152 810 aaKnown RBP eCLIP5.5□□□□□ -1.539e-6■■□□□ 13.5
KDM3B-209ENST00000542866 STAM2O75886 525 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MAP3K6O95382 1288 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PENKP01210 267 aaPredicted RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 HNRNPCP07910 306 aaKnown RBP eCLIP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SERPINA6P08185 405 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 HOXD10P28358 340 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PMLP29590 882 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 RGS2P41220 211 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ATP5OP48047 213 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 COPAP53621 1224 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 WNT7BP56706 349 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MTMR1Q13613 665 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DBN1Q16643 649 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MAP3K21Q5TCX8 1036 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CES4AQ5XG92 561 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 C16orf46Q6P387 395 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 NPNTQ6UXI9 565 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 ARL10Q8N8L6 244 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 SPATA18Q8TC71 538 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 MIPOL1Q8TD10 442 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 LRRN4Q8WUT4 740 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 PRPF31Q8WWY3 499 aaKnown RBP5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CNBD2Q96M20 576 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 C7orf26Q96N11 449 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 CPA4Q9UI42 421 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 POLIQ9UNA4 740 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 INPP5FQ9Y2H2 1132 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 DTNAQ9Y4J8 743 aa5.5□□□□□ -1.53
KDM3B-209ENST00000542866 AFG3L2Q9Y4W6 797 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms