RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 CCNG1P51959 295 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TUBA3CQ13748 450 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 AKAP14Q86UN6 197 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 NDUFAF2Q8N183 169 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 GLMNQ92990 594 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TAMM41Q96BW9 452 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 STK39Q9UEW8 545 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TRIM49D1C9J1S8 452 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 CREB1P16220 341 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 AMPD1P23109 780 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 HNRNPH3P31942 346 aaKnown RBP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 AQP4P55087 323 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 MRPL28Q13084 256 aaKnown RBP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 NCOA4Q13772 614 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 VEPH1Q14D04 833 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 OR52E8Q6IFG1 317 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 ZFP1Q6P2D0 407 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TCAIMQ8N3R3 496 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 TRPC4APQ8TEL6 797 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 FNIP1Q8TF40 1166 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 INTS2Q9H0H0 1204 aaKnown RBP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 DGAT1O75907 488 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 GSTT2P0CG29 244 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 GSTT2BP0CG30 244 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 KRT39Q6A163 491 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 C11orf74Q86VG3 221 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 BBS5Q8N3I7 341 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 FAM237BA0A1B0GVD1 139 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SUPT20HL2P0C7V6 817 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 PEX2P28328 305 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 EFNA5P52803 228 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 CARTPTQ16568 116 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 KLHL35Q6PF15 583 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
KDM3A-216ENST00000542128 SIK3Q9Y2K2 1263 aa12.84□□□□□ -0.35
KDM3A-216ENST00000542128 RAD51BO15315 384 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
KDM3A-216ENST00000542128 HBP1O60381 514 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 FKTNO75072 461 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 FUT4P22083 530 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 ERI1Q8IV48 349 aaKnown RBP12.83□□□□□ -0.36
KDM3A-216ENST00000542128 RNF148Q8N7C7 305 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 HDAC11Q96DB2 347 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 CAPNS2Q96L46 248 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 DHRS1Q96LJ7 313 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 SLC38A10Q9HBR0 1119 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 KBTBD4Q9NVX7 518 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 TAS2R1Q9NYW7 299 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 SEL1LQ9UBV2 794 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 SLC8A2Q9UPR5 921 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 UBE4BO95155 1302 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 ESYT2A0FGR8 921 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 PDZK1P1A8MUH7 402 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 PHLPP1O60346 1717 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 ALBP02768 609 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 THRAP10827 490 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 GNAZP19086 355 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 NTRK3Q16288 839 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 GJB7Q6PEY0 223 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 PAFAH2Q99487 392 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 IDI2Q9BXS1 227 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 RRN3P2A6NIE6 340 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 FOXO6A8MYZ6 492 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 TM7SF2O76062 418 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 KRT6AP02538 564 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 KRT6BP04259 564 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 PRKCBP05771 671 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 TRIM49P0CI25 452 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 TRIM49CP0CI26 452 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 CD97P48960 835 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
KDM3A-216ENST00000542128 APTXQ7Z2E3 356 aaKnown RBP12.83□□□□□ -0.36
KDM3A-216ENST00000542128 HAUS6Q7Z4H7 955 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 CCDC33Q8N5R6 958 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 RBM15BQ8NDT2 890 aaKnown RBP12.83□□□□□ -0.36
KDM3A-216ENST00000542128 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
KDM3A-216ENST00000542128 FAM25AB3EWG3 89 aa12.82□□□□□ -0.36
KDM3A-216ENST00000542128 FAM25CB3EWG5 89 aa12.82□□□□□ -0.36
KDM3A-216ENST00000542128 FAM25GB3EWG6 89 aa12.82□□□□□ -0.36
KDM3A-216ENST00000542128 CMPK2Q5EBM0 449 aa12.82□□□□□ -0.36
KDM3A-216ENST00000542128 SETD3Q86TU7 594 aaPredicted RBP12.82□□□□□ -0.36
KDM3A-216ENST00000542128 IRF2BP1Q8IU81 584 aa12.82□□□□□ -0.36
KDM3A-216ENST00000542128 DCUN1D1Q96GG9 259 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms