RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZNF638Q14966 1978 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 ANGPT1Q15389 498 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 ZSCAN23Q3MJ62 389 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 LY6G5CQ5SRR4 150 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 PKN3Q6P5Z2 889 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 Q6ZNB5 142 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 Q6ZS52 159 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 NOP9Q86U38 636 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 LUZP1Q86V48 1076 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 C12orf40Q86WS4 652 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 C1orf210Q8IVY1 113 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 KMT2EQ8IZD2 1858 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 SIX6OS1Q8N1H7 587 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 KIAA1958Q8N8K9 716 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 STK32AQ8WU08 396 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 PIWIL1Q96J94 861 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 NAT10Q9H0A0 1025 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 KCNH6Q9H252 994 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 LHX5Q9H2C1 402 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 CBX8Q9HC52 389 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 CNGB3Q9NQW8 809 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 FAM86C1Q9NVL1 165 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 PCDHGC3Q9UN70 934 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 MRPS17Q9Y2R5 130 aaKnown RBP10.2□□□□□ -0.78
YBX3-212ENST00000542002 SH3BP1Q9Y3L3 701 aa10.2□□□□□ -0.78
YBX3-212ENST00000542002 SLC12A8A0AV02 714 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 E5RJQ4 531 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 TRIM24O15164 1050 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 MED7O43513 233 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 ERBB2P04626 1255 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 CHRNB2P17787 502 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 PDCLQ13371 301 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 MEA1Q16626 185 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 TAF3Q5VWG9 929 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 SYPL2Q5VXT5 272 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 BTBD8Q5XKL5 378 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 TSSK4Q6SA08 328 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 DDX42Q86XP3 938 aaKnown RBP eCLIP10.19□□□□□ -0.78
YBX3-212ENST00000542002 FMNL3Q8IVF7 1028 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 ARHGAP18Q8N392 663 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 CPA6Q8N4T0 437 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 NAT16Q8N8M0 369 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 SLC20A1Q8WUM9 679 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 IRGQQ8WZA9 623 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 ERGIC2Q96RQ1 377 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 CPXM1Q96SM3 734 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 P2RY13Q9BPV8 354 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 CHRDQ9H2X0 955 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 NLRC4Q9NPP4 1024 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 ST7Q9NRC1 585 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 SPATA6Q9NWH7 488 aaPredicted RBP10.19□□□□□ -0.78
YBX3-212ENST00000542002 MARCH2Q9P0N8 246 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 TBC1D14Q9P2M4 693 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 RASAL2Q9UJF2 1139 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 AGO1Q9UL18 857 aaKnown RBP10.19□□□□□ -0.78
YBX3-212ENST00000542002 NAALADL1Q9UQQ1 740 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 TICRRQ7Z2Z1 1910 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 PATJQ8NI35 1801 aa10.19□□□□□ -0.78
YBX3-212ENST00000542002 K7EQS6 105 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 SLC9A3R1O14745 358 aaPredicted RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 NCAM2O15394 837 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 MSI1O43347 362 aaKnown RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 GFPT2O94808 682 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 NFATC1O95644 943 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 LTFP02788 710 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 MMEP08473 750 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 CHRM1P11229 460 aaPredicted RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 PTPN5P54829 565 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 PITX1P78337 314 aaPredicted RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 COG7P83436 770 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 NR1I3Q14994 352 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 TRIP4Q15650 581 aaPredicted RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 SMYD5Q6GMV2 418 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 RSRC2Q7L4I2 434 aaKnown RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 DENND1CQ8IV53 801 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 ETFBKMTQ8IXQ9 262 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 PHTF2Q8N3S3 785 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 C1orf131Q8NDD1 294 aaKnown RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 CD101Q93033 1021 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 MSANTD3Q96H12 275 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 PPP1R13BQ96KQ4 1090 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 PRRX2Q99811 253 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 SPHK2Q9NRA0 654 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 ABCC13Q9NSE7 274 aa10.18□□□□□ -0.78
YBX3-212ENST00000542002 NOCTQ9UK39 431 aaKnown RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 KIF26AQ9ULI4 1882 aaPredicted RBP10.18□□□□□ -0.78
YBX3-212ENST00000542002 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 A0A1B0GTH6 734 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 FBXO21O94952 628 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 SP9P0CG40 484 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 ADH5P11766 374 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 TDGF1P13385 188 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 CORO1AP31146 461 aaKnown RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 KRT9P35527 623 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms