RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 IGFBP7Q16270 282 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 TPGS1Q6ZTW0 290 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 METTL3Q86U44 580 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 DCBLD1Q8N8Z6 715 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 TMEM161BQ8NDZ6 487 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 LEO1Q8WVC0 666 aaPredicted RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 SNRNP27Q8WVK2 155 aaKnown RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 PRCCQ92733 491 aaPredicted RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 BIRC7Q96CA5 298 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 ZNF578Q96N58 590 aaPredicted RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 PLK2Q9NYY3 685 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 TBC1D14Q9P2M4 693 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 LRWD1Q9UFC0 647 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 L1RE1Q9UN81 338 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.37□□□□□ -0.75
CHFR-220ENST00000541817 SH3BP1Q9Y3L3 701 aa10.37□□□□□ -0.75
CHFR-220ENST00000541817 FLNCQ14315 2725 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 MYH11P35749 1972 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 GOLGA6L4A6NEF3 574 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 LAD1O00515 517 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 OLFM2O95897 454 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ADRB2P07550 413 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 MAPTP10636 758 aaKnown RBP10.36□□□□□ -0.75
CHFR-220ENST00000541817 ACADMP11310 421 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 TYRP14679 529 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ITGB6P18564 788 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 OXTRP30559 389 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ACOT2P49753 483 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 COPAP53621 1224 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 C21orf59P57076 290 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
CHFR-220ENST00000541817 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
CHFR-220ENST00000541817 CCDC81Q6ZN84 652 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ZSCAN30Q86W11 494 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 EXTL1Q92935 676 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 LLPHQ9BRT6 129 aaKnown RBP10.36□□□□□ -0.75
CHFR-220ENST00000541817 BBS2Q9BXC9 721 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 STARD5Q9NSY2 213 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 CCDC39Q9UFE4 941 aa10.36□□□□□ -0.75
CHFR-220ENST00000541817 H3BQV1 296 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 OGTO15294 1046 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 PAPSS1O43252 624 aaPredicted RBP10.35□□□□□ -0.75
CHFR-220ENST00000541817 COCHO43405 550 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 USP12O75317 370 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 WNT1P04628 370 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 CISD3P0C7P0 127 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 FAM87AP0C7U9 286 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 CDK4P11802 303 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 DGKGP49619 791 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 LIG4P49917 911 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 EVCP57679 992 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 ST3GAL1Q11201 340 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 SV2CQ496J9 727 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 RINT1Q6NUQ1 792 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 ZPBP2Q6X784 338 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 SAP25Q8TEE9 199 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 GTF3C6Q969F1 213 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 MYLPFQ96A32 169 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 P2RY11Q96G91 374 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 SLC6A18Q96N87 628 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 ELF4Q99607 663 aaPredicted RBP10.35□□□□□ -0.75
CHFR-220ENST00000541817 ARHGAP9Q9BRR9 750 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
CHFR-220ENST00000541817 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
CHFR-220ENST00000541817 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
CHFR-220ENST00000541817 SPTAN1Q13813 2472 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 BSNQ9UPA5 3926 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 NPHP3-ACAD11A0A0J9YXS1 232 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 GFRA2O00451 464 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 PFKFB2O60825 505 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CKMT2P17540 419 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 PFKLP17858 780 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 XBP1P17861 261 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 POU3F2P20265 443 aaPredicted RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 PAX3P23760 479 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 MYL7Q01449 175 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CYP27A1Q02318 531 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 SRSF6Q13247 344 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 ORC1Q13415 861 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 SERINC3Q13530 473 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 ZNF174Q15697 407 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CFAP221Q4G0U5 840 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 CPLX2Q6PUV4 134 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 KCNK18Q7Z418 384 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 PTRH1Q86Y79 214 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 FAM177A1Q8N128 213 aaPredicted RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 FBXL16Q8N461 479 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 SORCS1Q8WY21 1168 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 PDLIM2Q96JY6 352 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 XPO6Q96QU8 1125 aaKnown RBP10.34□□□□□ -0.75
CHFR-220ENST00000541817 ORAI3Q9BRQ5 295 aa10.34□□□□□ -0.75
CHFR-220ENST00000541817 MSTO1Q9BUK6 570 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms