RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 SYCE2Q6PIF2 218 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 GRASPQ7Z6J2 395 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 TTC30AQ86WT1 665 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 KRT73Q86Y46 540 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 FTSJ3Q8IY81 847 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 PSD4Q8NDX1 1056 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 FAM46DQ8NEK8 389 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 STYXQ8WUJ0 223 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 HDAC2Q92769 488 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 SPATA5L1Q9BVQ7 753 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 SMOC2Q9H3U7 446 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 IL17RBQ9NRM6 502 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 TMOD4Q9NZQ9 345 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 IFT80Q9P2H3 777 aaPredicted RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 SLC13A4Q9UKG4 626 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 AGAP1Q9UPQ3 857 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 RABGAP1Q9Y3P9 1069 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 LAS1LQ9Y4W2 734 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 FANCAO15360 1455 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 NEO1Q92859 1461 aa4.8□□□□□ -1.64
SNHG1-217ENST00000541578 POLR2AP24928 1970 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
SNHG1-217ENST00000541578 A0A1B0GVC2 190 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 AQP7P3A6NL99 342 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ADM5C9JUS6 153 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 IPO5O00410 1097 aaKnown RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 RGS10O43665 173 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ASNA1O43681 348 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 USP1O94782 785 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 KIF20AO95235 890 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 PIM1P11309 404 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 IL1R1P14778 569 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ITGALP20701 1170 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 AARSP49588 968 aaKnown RBP eCLIP4.79□□□□□ -1.645e-21■□□□□ 9.8
SNHG1-217ENST00000541578 CPT1AP50416 773 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 HNRNPMP52272 730 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 MRPS21P82921 87 aaKnown RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 MGAT5BQ3V5L5 792 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ARHGAP15Q53QZ3 475 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 FBXO47Q5MNV8 452 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 FAXCQ5TGI0 409 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 RETSATQ6NUM9 610 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 JMJD6Q6NYC1 403 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 CRTC1Q6UUV9 634 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 C4orf50Q6ZRC1 276 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 KRT28Q7Z3Y7 464 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 PEG10Q86TG7 708 aaKnown RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ESX1Q8N693 406 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 VGLL2Q8N8G2 317 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 CCDC89Q8N998 374 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 NTN5Q8WTR8 489 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 AFG1LQ8WV93 481 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 GRAMD1AQ96CP6 724 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 OSBPL9Q96SU4 736 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 KATNAL1Q9BW62 490 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 TPSD1Q9BZJ3 242 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 PCDHAC1Q9H158 963 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 KLK15Q9H2R5 256 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 RIC8AQ9NPQ8 531 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 KLC4Q9NSK0 619 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.79□□□□□ -1.64
SNHG1-217ENST00000541578 RAD54BQ9Y620 910 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 PTPRTO14522 1441 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 MADDQ8WXG6 1647 aa4.79□□□□□ -1.64
SNHG1-217ENST00000541578 ITIH6Q6UXX5 1313 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 UGGT2Q9NYU1 1516 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 PREX1Q8TCU6 1659 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 CCNT2O60583 730 aaKnown RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 DNAJB5O75953 348 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 RASAL1O95294 804 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 C1RP00736 705 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 POLBP06746 335 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ITGA5P08648 1049 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 SRGAP2BP0DMP2 458 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 VEGFAP15692 232 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 BTF3P20290 206 aaKnown RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 CHRM3P20309 590 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 C21orf58P58505 322 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 IRX6P78412 446 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 TRPC3Q13507 836 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 MAPKAPK3Q16644 382 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 PLA1AQ53H76 456 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 MRNIPQ6NTE8 343 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 PPP1R32Q7Z5V6 425 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ZNF384Q8TF68 577 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 UROC1Q96N76 676 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 AMBRA1Q9C0C7 1298 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 TTYH3Q9C0H2 523 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 BRD8Q9H0E9 1235 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ZCWPW1Q9H0M4 648 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 TAF1DQ9H5J8 278 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 TMEM8AQ9HCN3 771 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 WASH6PQ9NQA3 447 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms