RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 DHRS4Q9BTZ2 278 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 NPHS2Q9NP85 383 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 METTL5Q9NRN9 209 aaKnown RBP17.86■□□□□ 0.45
SPIDR-227ENST00000541342 LRRC42Q9Y546 428 aa17.86■□□□□ 0.45
SPIDR-227ENST00000541342 TFDP3Q5H9I0 405 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 FBXO47Q5MNV8 452 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 ZNF618Q5T7W0 954 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 LRRC38Q5VT99 294 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 EMC1Q8N766 993 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 KBTBD7Q8WVZ9 684 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 DPEP3Q9H4B8 488 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 DENND2DQ9H6A0 471 aaPredicted RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 SYNCQ9H7C4 482 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 PCDH9Q9HC56 1237 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 PIK3R2O00459 728 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 PTGESO14684 152 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 NEBLO76041 1014 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 MGAT3Q09327 533 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 PIGHQ14442 188 aaPredicted RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 GOLGA7BQ2TAP0 167 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 ZFYVE27Q5T4F4 411 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 CENPUQ71F23 418 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 NLRP9Q7RTR0 991 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 ENDOVQ8N8Q3 282 aaKnown RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 MCRS1Q96EZ8 462 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 NAF1Q96HR8 494 aaKnown RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 CAPNS2Q96L46 248 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 TLE6Q9H808 572 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 KIAA1257Q9ULG3 409 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 M0QZ92 97 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 C2CD2LO14523 706 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 ENTPD5O75356 428 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 IFNB1P01574 187 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 CD4P01730 458 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 GEMIN4P57678 1058 aaKnown RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 MTM1Q13496 603 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 CLNKQ7Z7G1 428 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 MTDHQ86UE4 582 aaKnown RBP17.85■□□□□ 0.45
SPIDR-227ENST00000541342 TTC30AQ86WT1 665 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 FAM167BQ9BTA0 163 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 FAM49BQ9NUQ9 324 aa17.85■□□□□ 0.45
SPIDR-227ENST00000541342 SGK1O00141 431 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 TAF11Q15544 211 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 HIF1AQ16665 826 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 PKDCCQ504Y2 493 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 SLC45A4Q5BKX6 768 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 HHATQ5VTY9 493 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 RFWD2Q8NHY2 731 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 CPT1BQ92523 772 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 PTPRN2Q92932 1015 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 SPDL1Q96EA4 605 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 TCRBV7S3A2A0A539 114 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 LRRD1A4D1F6 860 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 KPNA7A9QM74 516 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 IGFBP6P24592 240 aaPredicted RBP17.84■□□□□ 0.45
SPIDR-227ENST00000541342 PIWIL1Q96J94 861 aaKnown RBP17.84■□□□□ 0.45
SPIDR-227ENST00000541342 SSU72Q9NP77 194 aaKnown RBP17.84■□□□□ 0.45
SPIDR-227ENST00000541342 SLC17A7Q9P2U7 560 aa17.84■□□□□ 0.45
SPIDR-227ENST00000541342 EIF4E1BA6NMX2 242 aaKnown RBP17.83■□□□□ 0.45
SPIDR-227ENST00000541342 PSMA2P25787 234 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 ALDH3A1P30838 453 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 OVGP1Q12889 678 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 SPDYAQ5MJ70 313 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 OR6B3Q8NGW1 331 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 NUDCD1Q96RS6 583 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 AGO3Q9H9G7 860 aaKnown RBP17.83■□□□□ 0.45
SPIDR-227ENST00000541342 WDR35Q9P2L0 1181 aa17.83■□□□□ 0.45
SPIDR-227ENST00000541342 WDR91A4D1P6 747 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 E5RJQ4 531 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 LMO2P25791 158 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 CTCFP49711 727 aaPredicted RBP17.83■□□□□ 0.44
SPIDR-227ENST00000541342 AFF1P51825 1210 aaKnown RBP17.83■□□□□ 0.44
SPIDR-227ENST00000541342 RFWD3Q6PCD5 774 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 ADGRD1Q6QNK2 874 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 RSPH3Q86UC2 560 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 NAT8LQ8N9F0 302 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 PPP1R10Q96QC0 940 aaKnown RBP17.83■□□□□ 0.44
SPIDR-227ENST00000541342 GDAP2Q9NXN4 497 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 LNPEPQ9UIQ6 1025 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 LRCH4O75427 683 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 ZWINTO95229 277 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 CHRM1P11229 460 aaPredicted RBP17.83■□□□□ 0.44
SPIDR-227ENST00000541342 CETN2P41208 172 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 GSTCDQ8NEC7 633 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 TCP10LQ8TDR4 215 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 FNIP1Q8TF40 1166 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 DCAKDQ8WVC6 231 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 TSPAN18Q96SJ8 248 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 PAFAH2Q99487 392 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 SLC24A3Q9HC58 644 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 CACNG4Q9UBN1 327 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 ZFP69BQ9UJL9 534 aa17.83■□□□□ 0.44
SPIDR-227ENST00000541342 LIN7AO14910 233 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 CCNHP51946 323 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 SLC25A11Q02978 314 aaKnown RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 PMF1Q6P1K2 205 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 LIMS2Q7Z4I7 341 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 BANPQ8N9N5 519 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 PRR11Q96HE9 360 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms