RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SLC4A5Q9BY07 1137 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 KCNH6Q9H252 994 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 PDCL3Q9H2J4 239 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 ABCC13Q9NSE7 274 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 RBM12Q9NTZ6 932 aaKnown RBP9.67□□□□□ -0.86
SNHG1-215ENST00000540904 MARCH2Q9P0N8 246 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CYTH4Q9UIA0 394 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 LSM7Q9UK45 103 aaKnown RBP9.67□□□□□ -0.86
SNHG1-215ENST00000540904 STRIP2Q9ULQ0 834 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 CEP83Q9Y592 693 aa9.67□□□□□ -0.86
SNHG1-215ENST00000540904 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 FAM170AA1A519 330 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 E5RJQ4 531 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 H0Y858 1186 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 GOLGA6L19H0YKK7 550 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 TEX33O43247 280 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 MAP3K13O43283 966 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 GREM1O60565 184 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 STC2O76061 302 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 GFPT2O94808 682 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 ADH1CP00326 375 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 SERPINC1P01008 464 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 LTFP02788 710 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 CHRNB1P11230 501 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 CYP11B1P15538 503 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 SOX5P35711 763 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 RPL34P49207 117 aaKnown RBP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 TPM4P67936 248 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 COG7P83436 770 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 GRSF1Q12849 480 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 TCF15Q12870 199 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 PDCLQ13371 301 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 FILIP1LQ4L180 1135 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 LY6G5CQ5SRR4 150 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 TAF3Q5VWG9 929 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 RHBDF2Q6PJF5 856 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 NOP9Q86U38 636 aaKnown RBP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 WDTC1Q8N5D0 677 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 C1orf131Q8NDD1 294 aaKnown RBP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 FAM149B1Q96BN6 582 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 OTUB2Q96DC9 234 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 P2RY13Q9BPV8 354 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 LHX5Q9H2C1 402 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 OLA1Q9NTK5 396 aaKnown RBP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 SPATA6Q9NWH7 488 aaPredicted RBP9.66□□□□□ -0.86
SNHG1-215ENST00000540904 SFMBT1Q9UHJ3 866 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 PCDHGC3Q9UN70 934 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 ZDBF2Q9HCK1 2354 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 PATJQ8NI35 1801 aa9.66□□□□□ -0.86
SNHG1-215ENST00000540904 ZNF638Q14966 1978 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TICRRQ7Z2Z1 1910 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TRDMT1O14717 391 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 PAPSS1O43252 624 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 SART1O43290 800 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 MSI1O43347 362 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 CAVIN2O95810 425 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 KLKB1P03952 638 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 MMEP08473 750 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 ADH5P11766 374 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 NCAM1P13591 858 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 CORO1AP31146 461 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 STAT1P42224 750 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 MAGEA9P43362 315 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 RPS9P46781 194 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 GALK1P51570 392 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 PTPN5P54829 565 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 JAM2P57087 298 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 ARID5AQ03989 594 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 MTAPQ13126 283 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 CCINQ13939 588 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 LRRC32Q14392 662 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 ANGPT1Q15389 498 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 ANO4Q32M45 955 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TMEM196Q5HYL7 178 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 Q6ZNB5 142 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TPGS1Q6ZTW0 290 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TMEM110Q86TL2 294 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TMEM25Q86YD3 366 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 C1orf210Q8IVY1 113 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 EPS8L1Q8TE68 723 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 DDX1Q92499 740 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 CD101Q93033 1021 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 EXOC4Q96A65 974 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 PPP1R13BQ96KQ4 1090 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 NAP1L5Q96NT1 182 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 NOX5Q96PH1 765 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 CPXM1Q96SM3 734 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 SYNCQ9H7C4 482 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 FBRSL1Q9HCM7 1045 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 SPHK2Q9NRA0 654 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 TJP2Q9UDY2 1190 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 DAAM1Q9Y4D1 1078 aa9.65□□□□□ -0.86
SNHG1-215ENST00000540904 ARIH1Q9Y4X5 557 aaPredicted RBP9.65□□□□□ -0.86
SNHG1-215ENST00000540904 COL4A2P08572 1712 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms