RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 PLA2G4AP47712 749 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 SH3BGRP55822 239 aaPredicted RBP14.55□□□□□ -0.08
USP3-204ENST00000540797 DLG4P78352 724 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 ITGA7Q13683 1181 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 GIMAP4Q9NUV9 329 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 FBXL21Q9UKT6 434 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 NFAT5O94916 1531 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 CREMQ03060 361 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 KDSRQ06136 332 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 PPP3CAQ08209 521 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 BRD8Q9H0E9 1235 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 ABCC13Q9NSE7 274 aa14.55□□□□□ -0.08
USP3-204ENST00000540797 TMEM120BA0PK00 339 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 FRMD3A2A2Y4 597 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 GJB1P08034 283 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
USP3-204ENST00000540797 KRT72Q14CN4 511 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 UGCGQ16739 394 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ERAP2Q6P179 960 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 C11orf96Q7Z7L8 435 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 NRBF2Q96F24 287 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 RNF112Q9ULX5 631 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ARL2BPQ9Y2Y0 163 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 RIPK3Q9Y572 518 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ENO1P06733 434 aaKnown RBP14.54□□□□□ -0.08
USP3-204ENST00000540797 NECAB2Q7Z6G3 386 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 PRUNE1Q86TP1 453 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 LZTR1Q8N653 840 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ACTRT1Q8TDG2 376 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ING2Q9H160 280 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 MARCH2Q9P0N8 246 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 TIMM44O43615 452 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 PPP1R37O75864 691 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 APOA4P06727 396 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ADRB2P07550 413 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 MMP3P08254 477 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 MAP2K2P36507 400 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 MYO1HQ8N1T3 1032 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 HSD17B14Q9BPX1 270 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ASTN2O75129 1339 aaPredicted RBP14.54□□□□□ -0.08
USP3-204ENST00000540797 TRIM16O95361 564 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 PRLRP16471 622 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 AMPD1P23109 780 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 ATP5C1P36542 298 aaKnown RBP14.54□□□□□ -0.08
USP3-204ENST00000540797 E2F7Q96AV8 911 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 INPP4AQ96PE3 977 aaPredicted RBP14.54□□□□□ -0.08
USP3-204ENST00000540797 WHRNQ9P202 907 aa14.54□□□□□ -0.08
USP3-204ENST00000540797 GLP2RO95838 553 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 SH3RF1Q7Z6J0 888 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 ARMC2Q8NEN0 867 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 CASKIN2Q8WXE0 1202 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 HIPK3Q9H422 1215 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 SELENONQ9NZV5 590 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 CDH9Q9ULB4 789 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 YBX3P16989 372 aaKnown RBP eCLIP14.53□□□□□ -0.083e-6■■■□□ 16.3
USP3-204ENST00000540797 ZNF280AP59817 542 aaPredicted RBP14.53□□□□□ -0.08
USP3-204ENST00000540797 USP41Q3LFD5 358 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 GLIS3Q8NEA6 775 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 ZIM3Q96PE6 472 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 MRPL1Q9BYD6 325 aaKnown RBP14.53□□□□□ -0.08
USP3-204ENST00000540797 TKTL2Q9H0I9 626 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 RNPEPQ9H4A4 650 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 GIT1Q9Y2X7 761 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 IL10P22301 178 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 TNFSF9P41273 254 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 RAP1GDS1P52306 607 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 ANO5Q75V66 913 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 PHACTR4Q8IZ21 702 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 GPR20Q99678 358 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 NFKBIZQ9BYH8 718 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 OSGEPL1Q9H4B0 414 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 CDY1Q9Y6F8 540 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 RBAK-RBAKDNI3L0D1 243 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 SPTLC1O15269 473 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 B4GALT5O43286 388 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 STMN1P16949 149 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 RPL9P32969 192 aaKnown RBP14.53□□□□□ -0.08
USP3-204ENST00000540797 LRRC74AQ0VAA2 488 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 SGCGQ13326 291 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 PDE1CQ14123 709 aaPredicted RBP14.53□□□□□ -0.08
USP3-204ENST00000540797 CHI3L2Q15782 390 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 C16orf59Q7L2K0 433 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 TMEM51Q9NW97 253 aa14.53□□□□□ -0.08
USP3-204ENST00000540797 EPB42P16452 691 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 SERPINB8P50452 374 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 CAMK2GQ13555 558 aaPredicted RBP14.52□□□□□ -0.08
USP3-204ENST00000540797 HSDL1Q3SXM5 330 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 ACBD5Q5T8D3 534 aaPredicted RBP14.52□□□□□ -0.08
USP3-204ENST00000540797 TAGAPQ8N103 731 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.52□□□□□ -0.08
USP3-204ENST00000540797 FAM136AQ96C01 138 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 CEP41Q9BYV8 373 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 MYOM1P52179 1685 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 CAPN15O75808 1086 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 SERPINB4P48594 390 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 AP2B1P63010 937 aa14.52□□□□□ -0.08
USP3-204ENST00000540797 PDCD2Q16342 344 aaPredicted RBP14.52□□□□□ -0.08
USP3-204ENST00000540797 DNAJC19Q96DA6 116 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms