RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 WDR35Q9P2L0 1181 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 MUTYHQ9UIF7 546 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
DDB1-218ENST00000540784 ZNF638Q14966 1978 aaKnown RBP16.2■□□□□ 0.18
DDB1-218ENST00000540784 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 SLC12A8A0AV02 714 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 GOLGA8SH3BPF8 625 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 RTN2O75298 545 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 GRAP2O75791 330 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
DDB1-218ENST00000540784 SCNN1AP37088 669 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 EIF4A3P38919 411 aaKnown RBP16.2■□□□□ 0.18
DDB1-218ENST00000540784 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
DDB1-218ENST00000540784 FCHO2Q0JRZ9 810 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 PTP4A2Q12974 167 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 ARHGAP29Q52LW3 1261 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 DCAF6Q58WW2 860 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 UBALD2Q8IYN6 164 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 DEFB106AQ8N104 65 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 TC2NQ8N9U0 490 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 KHSRPQ92945 711 aaKnown RBP eCLIP16.2■□□□□ 0.18
DDB1-218ENST00000540784 VCPIP1Q96JH7 1222 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 BRD9Q9H8M2 597 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 GRPEL1Q9HAV7 217 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 TAS2R14Q9NYV8 317 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 IMPACTQ9P2X3 320 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 SFMBT1Q9UHJ3 866 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 SH3BP1Q9Y3L3 701 aa16.2■□□□□ 0.18
DDB1-218ENST00000540784 DOCK8Q8NF50 2099 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 E2F8A0AVK6 867 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 CHADO15335 359 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 NARSO43776 548 aaKnown RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 HMBSP08397 361 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 IRF1P10914 325 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 SRFP11831 508 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 KPNA1P52294 538 aaPredicted RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 CDK17Q00537 523 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 MTF1Q14872 753 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 ZNF77Q15935 545 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 FAM102AQ5T9C2 384 aaPredicted RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 SYPL2Q5VXT5 272 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 MSANTD2Q6P1R3 559 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 MCOLN2Q8IZK6 566 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 OLIG1Q8TAK6 271 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 IRF7Q92985 503 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 PIWIL1Q96J94 861 aaKnown RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 ZFRQ96KR1 1074 aaKnown RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 CCDC42Q96M95 316 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 SLC2A13Q96QE2 648 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 CHP1Q99653 195 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 COL25A1Q9BXS0 654 aaPredicted RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 DUS2Q9NX74 493 aaKnown RBP16.19■□□□□ 0.18
DDB1-218ENST00000540784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.19■□□□□ 0.18
DDB1-218ENST00000540784 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
DDB1-218ENST00000540784 A0A087X0T9 212 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 SLC9A3R1O14745 358 aaPredicted RBP16.18■□□□□ 0.18
DDB1-218ENST00000540784 DCXO43602 365 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 AKR1B10O60218 316 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 FAM228BP0C875 321 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 ALADP13716 330 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 NOS2P35228 1153 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 MATKP42679 507 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 PFKPQ01813 784 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
DDB1-218ENST00000540784 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 HTR3DQ70Z44 454 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 MON1BQ7L1V2 547 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 SPC24Q8NBT2 197 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 ZFYVE19Q96K21 471 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 PANX2Q96RD6 677 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 DCLK3Q9C098 648 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 ISCUQ9H1K1 167 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 NHEJ1Q9H9Q4 299 aaPredicted RBP16.18■□□□□ 0.18
DDB1-218ENST00000540784 SLC2A4RGQ9NR83 387 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 TBC1D14Q9P2M4 693 aa16.18■□□□□ 0.18
DDB1-218ENST00000540784 LSM7Q9UK45 103 aaKnown RBP16.18■□□□□ 0.18
DDB1-218ENST00000540784 HBS1LQ9Y450 684 aaKnown RBP16.18■□□□□ 0.18
DDB1-218ENST00000540784 GOLGA6L6A8MZA4 724 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 TNFRSF10AO00220 468 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 DAB1O75553 588 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 KRT3P12035 628 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 GBP1P32455 592 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 IFNAR2P48551 515 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 ZXDAP98168 799 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 USP4Q13107 963 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 PDGFRLQ15198 375 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
DDB1-218ENST00000540784 ARCQ7LC44 396 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 RIN3Q8TB24 985 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 CSGALNACT1Q8TDX6 532 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 DQX1Q8TE96 717 aaKnown RBP16.17■□□□□ 0.18
DDB1-218ENST00000540784 OSCP1Q8WVF1 389 aa16.17■□□□□ 0.18
DDB1-218ENST00000540784 EDAQ92838 391 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms