RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CNOT8Q9UFF9 292 aaKnown RBP11.12□□□□□ -0.63
ATL3-204ENST00000540699 CDH7Q9ULB5 785 aa11.12□□□□□ -0.63
ATL3-204ENST00000540699 A0A1W2PRU2 124 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 C2CD4DB7Z1M9 353 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 ANHXE9PGG2 379 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 MYL4P12829 197 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 LAMP2P13473 410 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 GPD2P43304 727 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 PLA2G4AP47712 749 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 PPP3CCP48454 512 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 RPL34P49207 117 aaKnown RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 SLC5A3P53794 718 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 PTPN5P54829 565 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 NAP1L1P55209 391 aaKnown RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 PDE4CQ08493 712 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 TAF12Q16514 161 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 RAB41Q5JT25 222 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 SNX30Q5VWJ9 437 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 PLEKHA7Q6IQ23 1121 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 C11orf63Q6NUN7 778 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 GPRIN1Q7Z2K8 1008 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 TDRD5Q8NAT2 981 aaKnown RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 KCTD13Q8WZ19 329 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 ACSF2Q96CM8 615 aaPredicted RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 NUP85Q9BW27 656 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 TRPV4Q9HBA0 871 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 CTTNBP2NLQ9P2B4 639 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 HESX1Q9UBX0 185 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 CHORDC1Q9UHD1 332 aaPredicted RBP11.11□□□□□ -0.63
ATL3-204ENST00000540699 ZMYM5Q9UJ78 669 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 CDC23Q9UJX2 597 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 CEP83Q9Y592 693 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
ATL3-204ENST00000540699 M0QYV0 167 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 FTCDO95954 541 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 CALB1P05937 261 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 ZDHHC11BP0C7U3 371 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PRLRP16471 622 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PFKLP17858 780 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 DDX6P26196 483 aaKnown RBP eCLIP11.1□□□□□ -0.63
ATL3-204ENST00000540699 YWHAQP27348 245 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 GABRB2P47870 512 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 TERF1P54274 439 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 SLC8A3P57103 927 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 SIGLEC14Q08ET2 396 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 TEAD2Q15562 447 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 C2CD6Q53TS8 623 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 NT5DC3Q86UY8 548 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PIGZQ86VD9 579 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 MON1AQ86VX9 555 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 SCML4Q8N228 414 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 MYRIPQ8NFW9 859 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 UBA3Q8TBC4 463 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 ASIC4Q96FT7 647 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 PHOX2BQ99453 314 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 ATXN3LQ9H3M9 355 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 GOLPH3Q9H4A6 298 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 MAGED2Q9UNF1 606 aaPredicted RBP11.1□□□□□ -0.63
ATL3-204ENST00000540699 SCML2Q9UQR0 700 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
ATL3-204ENST00000540699 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 TULP2O00295 520 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 GABBR2O75899 941 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 OLFM2O95897 454 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 GJA1P17302 382 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 FCARP24071 287 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 GBP2P32456 591 aaPredicted RBP11.09□□□□□ -0.63
ATL3-204ENST00000540699 TAF10Q12962 218 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 PDCLQ13371 301 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 MAMLD1Q13495 774 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 HTR4Q13639 388 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ARHGAP15Q53QZ3 475 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 IER5LQ5T953 404 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ERICH1Q86X53 443 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ZNF276Q8N554 614 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ING5Q8WYH8 240 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 MRPS31Q92665 395 aaKnown RBP11.09□□□□□ -0.63
ATL3-204ENST00000540699 NXPE3Q969Y0 559 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 HES6Q96HZ4 224 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ZSWIM3Q96MP5 696 aa11.09□□□□□ -0.63
ATL3-204ENST00000540699 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms