RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 TSPAN16Q9UKR8 245 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 CDV3Q9UKY7 258 aaKnown RBP22.03■■□□□ 1.12
CHFR-217ENST00000540537 KIAA1257Q9ULG3 409 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 TBC1D3BA6NDS4 549 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 STC2O76061 302 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 KLF8O95600 359 aaPredicted RBP22.02■■□□□ 1.12
CHFR-217ENST00000540537 GNA14O95837 355 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 VDRP11473 427 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 CD19P15391 556 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 TKTL1P51854 596 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 COG7P83436 770 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 BST2Q10589 180 aaKnown RBP22.02■■□□□ 1.12
CHFR-217ENST00000540537 PAK1Q13153 545 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 PLK5Q496M5 336 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 EOGTQ5NDL2 527 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 PRR23CQ6ZRP0 262 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 TERB1Q8NA31 727 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 KCNV2Q8TDN2 545 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 CNOT6LQ96LI5 555 aaKnown RBP22.02■■□□□ 1.12
CHFR-217ENST00000540537 BBS2Q9BXC9 721 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 ZNF510Q9Y2H8 683 aa22.02■■□□□ 1.12
CHFR-217ENST00000540537 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.02■■□□□ 1.12
CHFR-217ENST00000540537 NEDD8-MDP1E9PL57 170 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 CACNG3O60359 315 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 ZBED1O96006 694 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 PAEPP09466 180 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 MARSP56192 900 aaKnown RBP22.01■■□□□ 1.11
CHFR-217ENST00000540537 PDE4CQ08493 712 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 EMC10Q5UCC4 262 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 PM20D1Q6GTS8 502 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 GRAMD4Q6IC98 578 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 ANO7Q6IWH7 933 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 MIB1Q86YT6 1006 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 TRIML1Q8N9V2 468 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 XPO6Q96QU8 1125 aaKnown RBP22.01■■□□□ 1.11
CHFR-217ENST00000540537 DUSP15Q9H1R2 295 aaPredicted RBP22.01■■□□□ 1.11
CHFR-217ENST00000540537 DNAJC17Q9NVM6 304 aaKnown RBP22.01■■□□□ 1.11
CHFR-217ENST00000540537 RASAL2Q9UJF2 1139 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 PCDHGA5Q9Y5G8 931 aa22.01■■□□□ 1.11
CHFR-217ENST00000540537 SGK1O00141 431 aa22■■□□□ 1.11
CHFR-217ENST00000540537 O00370 1275 aa22■■□□□ 1.11
CHFR-217ENST00000540537 ALDH1A2O94788 518 aa22■■□□□ 1.11
CHFR-217ENST00000540537 RHOBTB1O94844 696 aa22■■□□□ 1.11
CHFR-217ENST00000540537 SETSIPP0DME0 302 aa22■■□□□ 1.11
CHFR-217ENST00000540537 TYRP14679 529 aa22■■□□□ 1.11
CHFR-217ENST00000540537 YWHAGP61981 247 aaKnown RBP eCLIP22■■□□□ 1.11
CHFR-217ENST00000540537 UBE2HP62256 183 aa22■■□□□ 1.11
CHFR-217ENST00000540537 EFEMP1Q12805 493 aa22■■□□□ 1.11
CHFR-217ENST00000540537 ELF2Q15723 593 aa22■■□□□ 1.11
CHFR-217ENST00000540537 USP39Q53GS9 565 aaKnown RBP22■■□□□ 1.11
CHFR-217ENST00000540537 TMEM270Q6UE05 265 aa22■■□□□ 1.11
CHFR-217ENST00000540537 TMEM92Q6UXU6 159 aa22■■□□□ 1.11
CHFR-217ENST00000540537 TPGS1Q6ZTW0 290 aa22■■□□□ 1.11
CHFR-217ENST00000540537 TRMT11Q7Z4G4 463 aaKnown RBP22■■□□□ 1.11
CHFR-217ENST00000540537 C11orf74Q86VG3 221 aa22■■□□□ 1.11
CHFR-217ENST00000540537 TRIM59Q8IWR1 403 aa22■■□□□ 1.11
CHFR-217ENST00000540537 MDGA1Q8NFP4 955 aa22■■□□□ 1.11
CHFR-217ENST00000540537 LMO3Q8TAP4 145 aa22■■□□□ 1.11
CHFR-217ENST00000540537 NETO1Q8TDF5 533 aa22■■□□□ 1.11
CHFR-217ENST00000540537 RTKNQ9BST9 563 aa22■■□□□ 1.11
CHFR-217ENST00000540537 ULBP1Q9BZM6 244 aa22■■□□□ 1.11
CHFR-217ENST00000540537 DCLK3Q9C098 648 aa22■■□□□ 1.11
CHFR-217ENST00000540537 ARRDC1-AS1Q9H2J1 176 aa22■■□□□ 1.11
CHFR-217ENST00000540537 LRRC4Q9HBW1 653 aa22■■□□□ 1.11
CHFR-217ENST00000540537 POLMQ9NP87 494 aaPredicted RBP22■■□□□ 1.11
CHFR-217ENST00000540537 TULP2O00295 520 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 HNRNPLP14866 589 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHFR-217ENST00000540537 ATXN1P54253 815 aaKnown RBP21.99■■□□□ 1.11
CHFR-217ENST00000540537 STX17P56962 302 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 PKDCCQ504Y2 493 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 C10orf76Q5T2E6 689 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 RSRC2Q7L4I2 434 aaKnown RBP21.99■■□□□ 1.11
CHFR-217ENST00000540537 ABCA7Q8IZY2 2146 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 PPM1KQ8N3J5 372 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 ZNF513Q8N8E2 541 aaPredicted RBP21.99■■□□□ 1.11
CHFR-217ENST00000540537 TPSD1Q9BZJ3 242 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 MARCH2Q9P0N8 246 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 STRIP2Q9ULQ0 834 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 STARD13Q9Y3M8 1113 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 PCDHB4Q9Y5E5 795 aa21.99■■□□□ 1.11
CHFR-217ENST00000540537 DCLK1O15075 740 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 TRIM24O15164 1050 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 ADAM23O75077 832 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 KLKB1P03952 638 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 ZNF806P0C7X5 589 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 GCNT1Q02742 428 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 KCNH2Q12809 1159 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 LCLAT1Q6UWP7 414 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 BHLHA9Q7RTU4 235 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 OLIG1Q8TAK6 271 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 KCTD13Q8WZ19 329 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 SRRTQ9BXP5 876 aaKnown RBP21.98■■□□□ 1.11
CHFR-217ENST00000540537 OLA1Q9NTK5 396 aaKnown RBP21.98■■□□□ 1.11
CHFR-217ENST00000540537 CHMP5Q9NZZ3 219 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 KIAA1468Q9P260 1216 aa21.98■■□□□ 1.11
CHFR-217ENST00000540537 FGFR1OPO95684 399 aaKnown RBP21.97■■□□□ 1.11
CHFR-217ENST00000540537 CORO1AP31146 461 aaKnown RBP21.97■■□□□ 1.11
CHFR-217ENST00000540537 CHKAP35790 457 aa21.97■■□□□ 1.11
CHFR-217ENST00000540537 ADIGQ0VDE8 80 aa21.97■■□□□ 1.11
CHFR-217ENST00000540537 STILQ15468 1287 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms