RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	PPP1R3G	B7ZBB8	358 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	PSMA7	O14818	248 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	DCLK1	O15075	740 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	GDF9	O60383	454 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	STC2	O76061	302 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	KLKB1	P03952	638 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	CISD3	P0C7P0	127 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	TIE1	P35590	1138 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	FMO5	P49326	533 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	COG7	P83436	770 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	PKDCC	Q504Y2	493 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	PMS2CL	Q68D20	193 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	TTI2	Q6NXR4	508 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	NUDT18	Q6ZVK8	323 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	BHLHA9	Q7RTU4	235 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	SCML4	Q8N228	414 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	ARHGAP18	Q8N392	663 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	CCDC33	Q8N5R6	958 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	NAT16	Q8N8M0	369 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	LMO3	Q8TAP4	145 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	CD248	Q9HCU0	757 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	VPS45	Q9NRW7	570 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	NAGPA	Q9UK23	515 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	LSM7	Q9UK45	103 aa	Known RBP	13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	ZNF510	Q9Y2H8	683 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	PI4KA	P42356	2102 aa		13.78	□□□□□ -0.2
SEMA4D-223	ENST00000540475	BCLAF3	A2AJT9	711 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TBC1D3B	A6NDS4	549 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	XPO1	O14980	1071 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MDM4	O15151	490 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	P4HA2	O15460	535 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ALDH1A2	O94788	518 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	KLF8	O95600	359 aa	Predicted RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	IRF1	P10914	325 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RALA	P11233	206 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TYR	P14679	529 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TBXAS1	P24557	533 aa	Predicted RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MPL	P40238	635 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	P2RY2	P41231	377 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MARS	P56192	900 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	YWHAE	P62258	255 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	KDSR	Q06136	332 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	STIM1	Q13586	685 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MORC3	Q14149	939 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ELF2	Q15723	593 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ANO4	Q32M45	955 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SPDYC	Q5MJ68	293 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	C10orf120	Q5SQS8	335 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TCERG1L	Q5VWI1	586 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TRMT11	Q7Z4G4	463 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	FAM217A	Q8IXS0	508 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	KCTD13	Q8WZ19	329 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	JAKMIP2	Q96AA8	810 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	P2RY11	Q96G91	374 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	XPO6	Q96QU8	1125 aa	Known RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DCLK3	Q9C098	648 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	POLM	Q9NP87	494 aa	Predicted RBP	13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NUDT5	Q9UKK9	219 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TSPAN16	Q9UKR8	245 aa		13.77	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DCDC2B	A2VCK2	349 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475		O00370	1275 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TRIM24	O15164	1050 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PENK	P01210	267 aa	Predicted RBP	13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PAEP	P09466	180 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	VDR	P11473	427 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SLC8A3	P57103	927 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PDE4C	Q08493	712 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SF3A2	Q15428	464 aa	Known RBP	13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MAP7D1	Q3KQU3	841 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SGO2	Q562F6	1265 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GRAMD4	Q6IC98	578 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ANO7	Q6IWH7	933 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CPXM2	Q8N436	756 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GABRG3	Q99928	467 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BBS2	Q9BXC9	721 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TPSD1	Q9BZJ3	242 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RXFP3	Q9NSD7	469 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SLC27A6	Q9Y2P4	619 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SPTBN2	O15020	2390 aa		13.76	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CNOT1	A5YKK6	2376 aa	Known RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CKAP5	Q14008	2032 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475		A0A1W2PQF6	199 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PRRT4	C9JH25	899 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TULP2	O00295	520 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GADD45B	O75293	160 aa	Predicted RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ZBED1	O96006	694 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BCKDHB	P21953	392 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NTSR1	P30989	418 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CHKA	P35790	457 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TKTL1	P51854	596 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BCAT1	P54687	386 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	YWHAG	P61981	247 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BST2	Q10589	180 aa	Known RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	FYB2	Q5VWT5	728 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LCLAT1	Q6UWP7	414 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MIB1	Q86YT6	1006 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TRIM59	Q8IWR1	403 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms