RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 ERLEC1Q96DZ1 483 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 SLC6A17Q9H1V8 727 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 ZSCAN16Q9H4T2 348 aaPredicted RBP21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 CD93Q9NPY3 652 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 RAD54BQ9Y620 910 aa21.08■□□□□ 0.97
LPCAT3-210ENST00000540090 ADAMTS9Q9P2N4 1935 aa21.08■□□□□ 0.96
LPCAT3-210ENST00000540090 EXOC3O60645 756 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 CCDC130P13994 396 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 GNSP15586 552 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 MAP3K7CLP57077 242 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 SCAPQ12770 1279 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 STK38Q15208 465 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 WDR45BQ5MNZ6 344 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 METTL3Q86U44 580 aaKnown RBP21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 PARD3BQ8TEW8 1205 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 CACNA2D2Q9NY47 1150 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 LSM7Q9UK45 103 aaKnown RBP21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 FBXO10Q9UK96 956 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 PCDHB9Q9Y5E1 797 aa21.07■□□□□ 0.96
LPCAT3-210ENST00000540090 WASH3PC4AMC7 463 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 PPP6R2O75170 966 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 MAOBP27338 520 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 CD6P30203 668 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 DGKGP49619 791 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 GOLGA8FQ08AF8 430 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 GOLGA8DPQ0D2H9 430 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 KNOP1Q1ED39 458 aaKnown RBP21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 KLHDC10Q6PID8 442 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 SCARA5Q6ZMJ2 495 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 DNASE2BQ8WZ79 361 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 ELMO3Q96BJ8 720 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 ZDHHC5Q9C0B5 715 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 OSER1Q9NX31 292 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 SCML2Q9UQR0 700 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 CEP192Q8TEP8 1941 aa21.06■□□□□ 0.96
LPCAT3-210ENST00000540090 LRRIQ3A6PVS8 624 aaPredicted RBP21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 SPTLC2O15270 562 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 VNN1O95497 513 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 FTH1P19P0C7X4 201 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 PLA2G4AP47712 749 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 GRIK2Q13002 908 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 CCNI2Q6ZMN8 369 aaPredicted RBP21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 Q6ZNB5 142 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 UNC93AQ86WB7 457 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 NAXDQ8IW45 347 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 C12orf29Q8N999 325 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 SLC39A2Q9NP94 309 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 TFIP11Q9UBB9 837 aaKnown RBP21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 NFE2L3Q9Y4A8 694 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 GPSM3Q9Y4H4 160 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 NBEAQ8NFP9 2946 aa21.05■□□□□ 0.96
LPCAT3-210ENST00000540090 ANKRD11Q6UB99 2663 aaPredicted RBP21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 P4HA1P13674 534 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 NDST1P52848 882 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 ORC1Q13415 861 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 SGSM1Q2NKQ1 1148 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 SHC4Q6S5L8 630 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 KIAA1324Q6UXG2 1013 aaKnown RBP21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 PNPLA1Q8N8W4 532 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 P2RY11Q96G91 374 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 NMUR1Q9HB89 426 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 ITM2CQ9NQX7 267 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 WSB2Q9NYS7 404 aaPredicted RBP21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 STON1Q9Y6Q2 735 aa21.04■□□□□ 0.96
LPCAT3-210ENST00000540090 A0A1B0GTW7 788 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 PVALEFA0A1B0GWK0 134 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 HHLA1C9JL84 531 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 CBFA2T3O75081 653 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 CLSTN1O94985 981 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 RPN1P04843 607 aaKnown RBP21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 CASP1P29466 404 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 ZNF132P52740 706 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 FUT11Q495W5 492 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 GPRIN1Q7Z2K8 1008 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 GLRX5Q86SX6 157 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 CADM4Q8NFZ8 388 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 GOLGA5Q8TBA6 731 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 TOE1Q96GM8 510 aaKnown RBP21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 INTS4Q96HW7 963 aaKnown RBP21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 BLZF1Q9H2G9 400 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 MAGEF1Q9HAY2 307 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 PRDM16Q9HAZ2 1276 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 DMAC2Q9NW81 257 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 PLK2Q9NYY3 685 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 USP36Q9P275 1121 aaKnown RBP21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 HMGXB4Q9UGU5 601 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 DNMT3LQ9UJW3 386 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 SLC27A6Q9Y2P4 619 aa21.03■□□□□ 0.96
LPCAT3-210ENST00000540090 NPC1O15118 1278 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 CYP26A1O43174 497 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 CUTAO60888 179 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 FAM200BP0CF97 657 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 RARGP13631 454 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 ACO1P21399 889 aaKnown RBP21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 ENPP2Q13822 863 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 STARD3Q14849 445 aa21.02■□□□□ 0.96
LPCAT3-210ENST00000540090 CLEC20AQ6ZU45 233 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms