RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 IFI16Q16666 785 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SYCE2Q6PIF2 218 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 GAREM2Q75VX8 874 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 BEND5Q7L4P6 421 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CPNE8Q86YQ8 564 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 LRRC57Q8N9N7 239 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CALR3Q96L12 384 aaKnown RBP19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 ADAM33Q9BZ11 813 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 SFXN1Q9H9B4 322 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 CLIC5Q9NZA1 410 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TRPM5Q9NZQ8 1165 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 IP6K2Q9UHH9 426 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 NUDT5Q9UKK9 219 aa19.77■□□□□ 0.76
TNFRSF1A-213ENST00000540022 TNFRSF10AO00220 468 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 DPYSL4O14531 572 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PROSCO94903 275 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RARGP13631 454 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PTPN2P17706 415 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 GABRR2P28476 465 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SDC4P31431 198 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PTPN9P43378 593 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 EPHA5P54756 1037 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CLUL1Q15846 466 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 C15orf59Q2T9L4 293 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SH3PXD2AQ5TCZ1 1133 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SNX30Q5VWJ9 437 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ANKRD54Q6NXT1 300 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TMC5Q6UXY8 1006 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CMASQ8NFW8 434 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NPY6RQ99463 290 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CNPY3Q9BT09 278 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TRIM62Q9BVG3 475 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ASAH2Q9NR71 780 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 HYOU1Q9Y4L1 999 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NRG2O14511 850 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 KIF5CO60282 957 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RHOP08100 348 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 MYL4P12829 197 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 IL9P15248 144 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NTHL1P78549 312 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ATP11AP98196 1134 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PIGHQ14442 188 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RAB6CQ53S08 254 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 OTUD1Q5VV17 481 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 DAB2IPQ5VWQ8 1189 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 C11orf63Q6NUN7 778 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 DAAM2Q86T65 1068 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 DQX1Q8TE96 717 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SMG7Q92540 1137 aaKnown RBP19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NT5C3BQ969T7 300 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 MSLNLQ96KJ4 702 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RAB6CQ9H0N0 254 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CCSER2Q9H7U1 834 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ALG6Q9Y672 507 aa19.76■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ESPNB1AK53 854 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CCR2P41597 374 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PPP3CCP48454 512 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SULT1E1P49888 294 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CDO1Q16878 200 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SLC25A52Q3SY17 297 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PABPC1LQ4VXU2 614 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ZNF569Q5MCW4 686 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RARS2Q5T160 578 aaKnown RBP19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PTCRAQ6ISU1 281 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 GRASPQ7Z6J2 395 aaPredicted RBP19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SLFN11Q7Z7L1 901 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ARFGAP1Q8N6T3 406 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NIPA2Q8N8Q9 360 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TRIM58Q8NG06 486 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ADAM32Q8TC27 787 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TBCBQ99426 244 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CALCOCO1Q9P1Z2 691 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 STAP1Q9ULZ2 295 aa19.75■□□□□ 0.75
TNFRSF1A-213ENST00000540022 A0A1W2PRU2 124 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 GRXCR2A6NFK2 248 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TLR5O60602 858 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TBX18O95935 607 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SRGAP2BP0DMP2 458 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RALAP11233 206 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 GJA1P17302 382 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 NYAP1Q6ZVC0 841 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RSRC2Q7L4I2 434 aaKnown RBP19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 BNIPLQ7Z465 357 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 SLC35F6Q8N357 371 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 RNF139Q8WU17 664 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 CENPIQ92674 756 aaPredicted RBP19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TCEAL4Q96EI5 215 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ALS2CR12Q96Q35 445 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 S1PR5Q9H228 398 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 ATXN3LQ9H3M9 355 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 PIDD1Q9HB75 910 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 LCMT1Q9UIC8 334 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 USTQ9Y2C2 406 aa19.74■□□□□ 0.75
TNFRSF1A-213ENST00000540022 C2orf78A6NCI8 922 aa19.73■□□□□ 0.75
TNFRSF1A-213ENST00000540022 M0QYT0 321 aa19.73■□□□□ 0.75
TNFRSF1A-213ENST00000540022 MDM4O15151 490 aa19.73■□□□□ 0.75
TNFRSF1A-213ENST00000540022 TRUB2O95900 331 aaKnown RBP19.73■□□□□ 0.75
TNFRSF1A-213ENST00000540022 FTCDO95954 541 aa19.73■□□□□ 0.75
TNFRSF1A-213ENST00000540022 COMTP21964 271 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms