RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ANKRD20A12PQ8NF67 263 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 STK32AQ8WU08 396 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 EZH1Q92800 747 aaPredicted RBP19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 CDK5RAP1Q96SZ6 601 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 STK33Q9BYT3 514 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 CHRDQ9H2X0 955 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 MARCH2Q9P0N8 246 aa19.17■□□□□ 0.66
SNRPA1-203ENST00000540017 MYOFQ9NZM1 2061 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 SMTNL1A8MU46 457 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 E5RJQ4 531 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 F8VZ95 297 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 FYNP06241 537 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 MAGEA9P43362 315 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 POLR2FP61218 127 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 NR1H3Q13133 447 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 LY6G5CQ5SRR4 150 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 Q6ZNB5 142 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 RSRC2Q7L4I2 434 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 TMEM110Q86TL2 294 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 TMEM25Q86YD3 366 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 IRGQQ8WZA9 623 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 PHOX2BQ99453 314 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 P2RY13Q9BPV8 354 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 NLRC4Q9NPP4 1024 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 FAM86C1Q9NVL1 165 aa19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 SPATA6Q9NWH7 488 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-203ENST00000540017 CACNA1IQ9P0X4 2223 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 SLC12A8A0AV02 714 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 TEX33O43247 280 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 PAPSS1O43252 624 aaPredicted RBP19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 FBXO21O94952 628 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 EGFP01133 1207 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 LTFP02788 710 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 CYP11B1P15538 503 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 SLC6A11P48066 632 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 JAM2P57087 298 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 MESP2Q0VG99 397 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 PDCLQ13371 301 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 C12orf40Q86WS4 652 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 DDX1Q92499 740 aaKnown RBP19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 OTUB2Q96DC9 234 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 ERGIC2Q96RQ1 377 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 CPXM1Q96SM3 734 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 LHX5Q9H2C1 402 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 SPHK2Q9NRA0 654 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 ABCC13Q9NSE7 274 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 C2orf42Q9NWW7 574 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 SFMBT1Q9UHJ3 866 aa19.15■□□□□ 0.66
SNRPA1-203ENST00000540017 ANTXRLA6NF34 631 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 KRT9P35527 623 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 ACADSBP45954 432 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 BPIFB4P59827 614 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 COG7P83436 770 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 AMPD2Q01433 879 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 GOLGA8FQ08AF8 430 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 GOLGA8DPQ0D2H9 430 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 LRRC32Q14392 662 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 SKOR2Q2VWA4 1001 aaPredicted RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 DGKKQ5KSL6 1271 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 PKN3Q6P5Z2 889 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 NOP9Q86U38 636 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 LUZP1Q86V48 1076 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 FMNL3Q8IVF7 1028 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 C1orf131Q8NDD1 294 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 RNF139Q8WU17 664 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 CD101Q93033 1021 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 P2RY11Q96G91 374 aa19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 PIWIL1Q96J94 861 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 RTN4Q9NQC3 1192 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 OLA1Q9NTK5 396 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 LSM7Q9UK45 103 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-203ENST00000540017 FAM170AA1A519 330 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 MSI1O43347 362 aaKnown RBP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 GFPT2O94808 682 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 ADH1CP00326 375 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 ADH5P11766 374 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 CORO1AP31146 461 aaKnown RBP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 GRSF1Q12849 480 aaKnown RBP eCLIP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 TAF3Q5VWG9 929 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 MSANTD2Q6P1R3 559 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 SFTPA1Q8IWL2 248 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 ATOH1Q92858 354 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 PPP1R13BQ96KQ4 1090 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 PCMTD1Q96MG8 357 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 NAP1L5Q96NT1 182 aaPredicted RBP19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 STRIP2Q9ULQ0 834 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 VPS13AQ96RL7 3174 aa19.13■□□□□ 0.65
SNRPA1-203ENST00000540017 LAMTOR5O43504 91 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 SP9P0CG40 484 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 HOXC13P31276 330 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 PLA2G5P39877 138 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 TAF5Q15542 800 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 TRIP4Q15650 581 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 TSSK4Q6SA08 328 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 MAMSTRQ6ZN01 415 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 DENND1CQ8IV53 801 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 NAT16Q8N8M0 369 aa19.12■□□□□ 0.65
SNRPA1-203ENST00000540017 NEK11Q8NG66 645 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms