RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 SIT1Q9Y3P8 196 aa14.06□□□□□ -0.16
PRPF19-204ENST00000539960 PATJQ8NI35 1801 aa14.06□□□□□ -0.16
PRPF19-204ENST00000539960 FAM170BA6NMN3 283 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 SCAMP3O14828 347 aaKnown RBP14.05□□□□□ -0.16
PRPF19-204ENST00000539960 GREM1O60565 184 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 STC2O76061 302 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 LSM8O95777 96 aaKnown RBP14.05□□□□□ -0.16
PRPF19-204ENST00000539960 FYNP06241 537 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 CCDC172P0C7W6 258 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 CHRNB2P17787 502 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 AOC1P19801 751 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 CTHP32929 405 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 SOX9P48436 509 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 YWHAZP63104 245 aaKnown RBP14.05□□□□□ -0.16
PRPF19-204ENST00000539960 ARID5AQ03989 594 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 FIGNQ5HY92 759 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 CWF19L1Q69YN2 538 aaKnown RBP14.05□□□□□ -0.16
PRPF19-204ENST00000539960 C1orf228Q6PIY5 440 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 BEND5Q7L4P6 421 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 IRF2BP2Q7Z5L9 587 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 OTUB2Q96DC9 234 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 NUP58Q9BVL2 599 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 OSBPL6Q9BZF3 934 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 FOXQ1Q9C009 403 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 LTB4R2Q9NPC1 389 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 TJP2Q9UDY2 1190 aa14.05□□□□□ -0.16
PRPF19-204ENST00000539960 MTF2Q9Y483 593 aaPredicted RBP14.05□□□□□ -0.16
PRPF19-204ENST00000539960 SLC12A8A0AV02 714 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 NFATC1O95644 943 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 KLKB1P03952 638 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 ERBB2P04626 1255 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 GLI1P08151 1106 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 NCAM1P13591 858 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 FERP16591 822 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 GABRB2P47870 512 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 VCPP55072 806 aaKnown RBP14.04□□□□□ -0.16
PRPF19-204ENST00000539960 AMPD2Q01433 879 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 FMO1Q01740 532 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 UBXN2BQ14CS0 331 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 PTPN20Q4JDL3 420 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 EFHC1Q5JVL4 640 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 OR6B2Q6IFH4 312 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 MSANTD2Q6P1R3 559 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 RHBDF2Q6PJF5 856 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 TRIM72Q6ZMU5 477 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 ERICH1Q86X53 443 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 FMNL3Q8IVF7 1028 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 BBS7Q8IWZ6 715 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 PJA1Q8NG27 643 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 CPA5Q8WXQ8 436 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 FAM149B1Q96BN6 582 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 C18orf8Q96DM3 657 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 TRIM62Q9BVG3 475 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 DCLK3Q9C098 648 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 XPO4Q9C0E2 1151 aaKnown RBP14.04□□□□□ -0.16
PRPF19-204ENST00000539960 TTYH3Q9C0H2 523 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 SYNCQ9H7C4 482 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 AIPL1Q9NZN9 384 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 SFMBT1Q9UHJ3 866 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 LSM7Q9UK45 103 aaKnown RBP14.04□□□□□ -0.16
PRPF19-204ENST00000539960 NAALADL1Q9UQQ1 740 aa14.04□□□□□ -0.16
PRPF19-204ENST00000539960 HBS1LQ9Y450 684 aaKnown RBP14.04□□□□□ -0.16
PRPF19-204ENST00000539960 LRRC53A6NM62 1247 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 NCAM2O15394 837 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 CYP1A1P04798 512 aaPredicted RBP14.03□□□□□ -0.16
PRPF19-204ENST00000539960 TPM3P06753 285 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 HMBSP08397 361 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 GJA4P35212 333 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 NOMO3P69849 1222 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 SLC6A3Q01959 620 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 FZD5Q13467 585 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 DHCR24Q15392 516 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 TAF5Q15542 800 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 TRIP4Q15650 581 aaPredicted RBP14.03□□□□□ -0.16
PRPF19-204ENST00000539960 SYPL2Q5VXT5 272 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 NAA35Q5VZE5 725 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 TXNDC11Q6PKC3 985 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 Q6ZNB5 142 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 ZDHHC17Q8IUH5 632 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 ZNF687Q8N1G0 1237 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 TMEM105Q8N8V8 129 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 IPO4Q8TEX9 1081 aaKnown RBP14.03□□□□□ -0.16
PRPF19-204ENST00000539960 CHFRQ96EP1 664 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 PCDHB18PQ96TA0 734 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 AGPAT1Q99943 283 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 POPDC2Q9HBU9 364 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 ASNSD1Q9NWL6 643 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 NDRG2Q9UN36 371 aaKnown RBP14.03□□□□□ -0.16
PRPF19-204ENST00000539960 ZNF510Q9Y2H8 683 aa14.03□□□□□ -0.16
PRPF19-204ENST00000539960 ZDBF2Q9HCK1 2354 aa14.02□□□□□ -0.16
PRPF19-204ENST00000539960 F5P12259 2224 aa14.02□□□□□ -0.16
PRPF19-204ENST00000539960 A0A1W2PQJ5 194 aa14.02□□□□□ -0.17
PRPF19-204ENST00000539960 TRDMT1O14717 391 aaKnown RBP14.02□□□□□ -0.17
PRPF19-204ENST00000539960 CAPN9O14815 690 aa14.02□□□□□ -0.17
PRPF19-204ENST00000539960 CBFA2T2O43439 604 aa14.02□□□□□ -0.17
PRPF19-204ENST00000539960 CYP17A1P05093 508 aa14.02□□□□□ -0.17
PRPF19-204ENST00000539960 DCNP07585 359 aaKnown RBP14.02□□□□□ -0.17
PRPF19-204ENST00000539960 TARSP26639 723 aaKnown RBP14.02□□□□□ -0.17
PRPF19-204ENST00000539960 GALK1P51570 392 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms