RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NDRG1Q92597 394 aaKnown RBP17.58■□□□□ 0.41
COPS3-212ENST00000539941 CAVIN3Q969G5 261 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 ZNF689Q96CS4 500 aaPredicted RBP17.58■□□□□ 0.41
COPS3-212ENST00000539941 C8orf48Q96LL4 319 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 HINFPQ9BQA5 517 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 TRIM51Q9BSJ1 452 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 TTPALQ9BTX7 342 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 SNRNP25Q9BV90 132 aaKnown RBP17.58■□□□□ 0.41
COPS3-212ENST00000539941 FAM129AQ9BZQ8 928 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 PLEKHA4Q9H4M7 779 aa17.58■□□□□ 0.41
COPS3-212ENST00000539941 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.41
COPS3-212ENST00000539941 CAPN9O14815 690 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 OR4Q2P0C623 313 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 TFE3P19532 575 aaPredicted RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 CYP2F1P24903 491 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 RDXP35241 583 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 AIF1P55008 147 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 ADCY2Q08462 1091 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 TFDP2Q14188 446 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 DPYSL3Q14195 570 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 KRT81Q14533 505 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 DPYSL2Q16555 572 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 RAB6CQ53S08 254 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 DNAJC21Q5F1R6 531 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 BHLHA9Q7RTU4 235 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 TADA2BQ86TJ2 420 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 CMTR2Q8IYT2 770 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 C2orf15Q8WU43 125 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 ATG4AQ8WYN0 398 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 PGAP3Q96FM1 320 aaPredicted RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 SLC9A7Q96T83 725 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 ZNF670Q9BS34 389 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 RAB6CQ9H0N0 254 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 RC3H2Q9HBD1 1191 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 ABI2Q9NYB9 513 aaPredicted RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 ZMYND8Q9ULU4 1186 aaPredicted RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 NFU1Q9UMS0 254 aa17.58■□□□□ 0.4
COPS3-212ENST00000539941 DRG1Q9Y295 367 aaKnown RBP17.58■□□□□ 0.4
COPS3-212ENST00000539941 TNFRSF10BO14763 440 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 LIASO43766 372 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 FYNP06241 537 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 KCNJ1P48048 391 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 WDR5P61964 334 aaKnown RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 GPR17Q13304 367 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 USP41Q3LFD5 358 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 OTUD1Q5VV17 481 aaPredicted RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 HFE2Q6ZVN8 426 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 TMEM173Q86WV6 379 aaPredicted RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 RNF168Q8IYW5 571 aaPredicted RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 SPPL2BQ8TCT7 592 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 NKD2Q969F2 451 aaPredicted RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 CALN1Q9BXU9 219 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 MAK16Q9BXY0 300 aaKnown RBP17.57■□□□□ 0.4
COPS3-212ENST00000539941 ADAM33Q9BZ11 813 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 PCDH18Q9HCL0 1135 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 IL23AQ9NPF7 189 aa17.57■□□□□ 0.4
COPS3-212ENST00000539941 NT5C1B-RDH14C9J2C7 533 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 DAPK3O43293 454 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 CST8O60676 142 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 APOC2P02655 101 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 CD48P09326 243 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 SYN1P17600 705 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 CDR1P51861 262 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 RABGGTBP53611 331 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 SNX1Q13596 522 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 PTK6Q13882 451 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 HLTFQ14527 1009 aaKnown RBP eCLIP17.56■□□□□ 0.4
COPS3-212ENST00000539941 CASP8Q14790 479 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 PPP1R7Q15435 360 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 RTP2Q5QGT7 225 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 RFX6Q8HWS3 928 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 BCL7CQ8WUZ0 217 aaPredicted RBP17.56■□□□□ 0.4
COPS3-212ENST00000539941 FAF2Q96CS3 445 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 IGSF21Q96ID5 467 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 GDF15Q99988 308 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 PRDM16Q9HAZ2 1276 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 VPS18Q9P253 973 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 NAALADL1Q9UQQ1 740 aa17.56■□□□□ 0.4
COPS3-212ENST00000539941 M0QYT0 321 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 F9P00740 461 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 ECHS1P30084 290 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 PBX3P40426 434 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 SLC5A3P53794 718 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 VCPP55072 806 aaKnown RBP17.55■□□□□ 0.4
COPS3-212ENST00000539941 DEUP1Q05D60 604 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 BYSLQ13895 437 aaKnown RBP17.55■□□□□ 0.4
COPS3-212ENST00000539941 SYPL2Q5VXT5 272 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 SLC35B2Q8TB61 432 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 CCHCR1Q8TD31 782 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 NTAN1Q96AB6 310 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 ZBTB9Q96C00 473 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 ZNF558Q96NG5 402 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 RNF157Q96PX1 679 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 PCDH10Q9P2E7 1040 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 RCOR3Q9P2K3 495 aaPredicted RBP17.55■□□□□ 0.4
COPS3-212ENST00000539941 AP4E1Q9UPM8 1137 aa17.55■□□□□ 0.4
COPS3-212ENST00000539941 BACE2Q9Y5Z0 518 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms