RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 MAGEA4P43358 317 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ITGA8P53708 1063 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MFAP3P55082 362 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 SNAP25P60880 206 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 HTRA4P83105 476 aaPredicted RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 XIAPP98170 497 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ARHGAP1Q07960 439 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MMRN1Q13201 1228 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MESDQ14696 234 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 STXBP2Q15833 593 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 UBE2SQ16763 222 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 PTPROQ16827 1216 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 CLEC16AQ2KHT3 1053 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MUM1Q2TAK8 710 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 THEMIS2Q5TEJ8 643 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 TTBK2Q6IQ55 1244 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 TMEM214Q6NUQ4 689 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 SAMD3Q8N6K7 520 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ANKRD42Q8N9B4 389 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 PPTC7Q8NI37 304 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 PIP4K2CQ8TBX8 421 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ZNF564Q8TBZ8 553 aaPredicted RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MGARPQ8TDB4 240 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 AFG1LQ8WV93 481 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 IRGQQ8WZA9 623 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 SHC3Q92529 594 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 AZIN2Q96A70 460 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 LENG9Q96B70 501 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ERP27Q96DN0 273 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ZBTB10Q96DT7 871 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MRPL38Q96DV4 380 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 VCPIP1Q96JH7 1222 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 SMC6Q96SB8 1091 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 FIZ1Q96SL8 496 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 EIF2AK1Q9BQI3 630 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 GORASP1Q9BQQ3 440 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 DDX23Q9BUQ8 820 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 NIFKQ9BYG3 293 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 FRMD8P1Q9BZ68 369 aaPredicted RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 TRIM4Q9C037 500 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 CPVLQ9H3G5 476 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 EPB41L1Q9H4G0 881 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ZHX3Q9H4I2 956 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 CERS4Q9HA82 394 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 UBE2TQ9NPD8 197 aaPredicted RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 MAP3K20Q9NYL2 800 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 TAS2R14Q9NYV8 317 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ANKFY1Q9P2R3 1169 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 ASIC3Q9UHC3 531 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 NOCTQ9UK39 431 aaKnown RBP7.99□□□□□ -1.13
CCDC60-204ENST00000539847 VAV3Q9UKW4 847 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 C2CD2Q9Y426 696 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 LCTP09848 1927 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 NFASCO94856 1347 aa7.99□□□□□ -1.13
CCDC60-204ENST00000539847 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 HAS3O00219 553 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 IPO5O00410 1097 aaKnown RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 MEIS2O14770 477 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CLIC2O15247 247 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PSTPIP1O43586 416 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TYROBPO43914 113 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 NBNO60934 754 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ZC3H11AO75152 810 aaKnown RBP eCLIP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 RNF8O76064 485 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TJP3O95049 919 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CREB1P16220 341 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 GM2AP17900 193 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 KLRC2P26717 231 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 SLC16A2P36021 539 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ADCY8P40145 1251 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PEX19P40855 299 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 BPIFB4P59827 614 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CDR2Q01850 454 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 GHRHRQ02643 423 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 KLF1Q13351 362 aaPredicted RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PPP2R5CQ13362 524 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 MORF4L2Q15014 288 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TBCCQ15814 346 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 TRIM71Q2Q1W2 868 aaKnown RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CBWD6Q4V339 395 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CBWD3Q5JTY5 395 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CBWD5Q5RIA9 395 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 SNX30Q5VWJ9 437 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 GDF6Q6KF10 455 aaPredicted RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ADAT2Q7Z6V5 191 aaKnown RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CLNKQ7Z7G1 428 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CCDC25Q86WR0 208 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CHSY1Q86X52 802 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 CYP4X1Q8N118 509 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 MYCT1Q8N699 235 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 C7orf31Q8N865 590 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PARD3BQ8TEW8 1205 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 GDPD5Q8WTR4 605 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 ZNF75CPQ92670 426 aaPredicted RBP7.98□□□□□ -1.13
CCDC60-204ENST00000539847 APBB2Q92870 758 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PPP1R14BQ96C90 147 aa7.98□□□□□ -1.13
CCDC60-204ENST00000539847 PTCD3Q96EY7 689 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms