RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SH3BP5O60239 455 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 PHACTR2O75167 634 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 ZIC2O95409 532 aaPredicted RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 ADH1CP00326 375 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 EPB41P11171 864 aaKnown RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 KRT13P13646 458 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 HOXB2P14652 356 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 PSMC2P35998 433 aaKnown RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 GNL1P36915 607 aaPredicted RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 GRIA2P42262 883 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 CASP4P49662 377 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 TNNC1P63316 161 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 ACAP1Q15027 740 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 ISM2Q6H9L7 571 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 FOXR2Q6PJQ5 311 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 SCARA5Q6ZMJ2 495 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 TRAPPC11Q7Z392 1133 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 ETFBKMTQ8IXQ9 262 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 PARD3BQ8TEW8 1205 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 ZNF516Q92618 1163 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 FBXO32Q969P5 355 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 C8orf48Q96LL4 319 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 HSPA12BQ96MM6 686 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 SLC32A1Q9H598 525 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 CAPN10Q9HC96 672 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 EHD2Q9NZN4 543 aa15.8■□□□□ 0.12
USB1-203ENST00000539737 NXF1Q9UBU9 619 aaKnown RBP15.8■□□□□ 0.12
USB1-203ENST00000539737 GCN1Q92616 2671 aaKnown RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 WASH3PC4AMC7 463 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 TRIM66O15016 1216 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 MDM4O15151 490 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 TBX18O95935 607 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 NDUFV2P19404 249 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 BMP6P22004 513 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 ATXN3P54252 364 aaPredicted RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 MYL6P60660 151 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 NOP14P78316 857 aaKnown RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 CLDN10P78369 228 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 ZNF33AQ06730 810 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 PEAR1Q5VY43 1037 aaPredicted RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 TDRD10Q5VZ19 366 aaKnown RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 PAQR9Q6ZVX9 377 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 ZC3H3Q8IXZ2 948 aaKnown RBP15.79■□□□□ 0.12
USB1-203ENST00000539737 SDCBP2Q9H190 292 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 SLC6A14Q9UN76 642 aa15.79■□□□□ 0.12
USB1-203ENST00000539737 TMEM8BA6NDV4 472 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 LRRIQ3A6PVS8 624 aaPredicted RBP15.78■□□□□ 0.12
USB1-203ENST00000539737 PRRT4C9JH25 899 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 BEST1O76090 585 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 CAPNS1P04632 268 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
USB1-203ENST00000539737 YWHAQP27348 245 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 PDE6CP51160 858 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 GFPT1Q06210 699 aaPredicted RBP15.78■□□□□ 0.12
USB1-203ENST00000539737 SCAPQ12770 1279 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 PAK1Q13153 545 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 BIRC3Q13489 604 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 ANKRD40Q6AI12 368 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 KLHL10Q6JEL2 608 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 CACUL1Q86Y37 369 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 TERB1Q8NA31 727 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 MDM1Q8TC05 714 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 GPT2Q8TD30 523 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 PLEKHO2Q8TD55 490 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 NELFBQ8WX92 580 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 SYAP1Q96A49 352 aaPredicted RBP15.78■□□□□ 0.12
USB1-203ENST00000539737 JAKMIP2Q96AA8 810 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 CD248Q9HCU0 757 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.78■□□□□ 0.123e-9■■■■■ 81.5
USB1-203ENST00000539737 CACNA2D2Q9NY47 1150 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 HMGXB4Q9UGU5 601 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 NUDT5Q9UKK9 219 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 CTNND2Q9UQB3 1225 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 SH3BP1Q9Y3L3 701 aa15.78■□□□□ 0.12
USB1-203ENST00000539737 ACACAQ13085 2346 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 A0A0A0MRY4 1105 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 TRIM49BA6NDI0 452 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 A8MXQ7 604 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 IKBKBO14920 756 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 OPHN1O60890 802 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 FAM163BP0C2L3 166 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 CCDC130P13994 396 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 TRIM21P19474 475 aaKnown RBP15.77■□□□□ 0.12
USB1-203ENST00000539737 ATICP31939 592 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 TNFRSF4P43489 277 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 VAMP7P51809 220 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 SLC5A3P53794 718 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 PMS1P54277 932 aaKnown RBP15.77■□□□□ 0.12
USB1-203ENST00000539737 GAD2Q05329 585 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 DUOXA1Q1HG43 343 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 COL28A1Q2UY09 1125 aa15.77■□□□□ 0.12
USB1-203ENST00000539737 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms