RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 NCOR2Q9Y618 2525 aa17.62■□□□□ 0.41
DDB1-215ENST00000539712 SPTBN2O15020 2390 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.61■□□□□ 0.41
DDB1-215ENST00000539712 DCLK1O15075 740 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 LRP3O75074 770 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 ZBED1O96006 694 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 CALCAP01258 141 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 VDRP11473 427 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 ZNF132P52740 706 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 BCAT1P54687 386 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 KCNH2Q12809 1159 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 ANO4Q32M45 955 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 TMEM270Q6UE05 265 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 LCLAT1Q6UWP7 414 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 CACNA2D4Q7Z3S7 1137 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.61■□□□□ 0.41
DDB1-215ENST00000539712 MIB1Q86YT6 1006 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 TXNDC5Q8NBS9 432 aaKnown RBP17.61■□□□□ 0.41
DDB1-215ENST00000539712 KREMEN1Q96MU8 473 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 NT5C1BQ96P26 610 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 ULBP1Q9BZM6 244 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 SEMA4GQ9NTN9 838 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 DEC1Q9P2X7 70 aa17.61■□□□□ 0.41
DDB1-215ENST00000539712 CACNG3O60359 315 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 KLF8O95600 359 aaPredicted RBP17.6■□□□□ 0.41
DDB1-215ENST00000539712 GNA14O95837 355 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 PAEPP09466 180 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 CISD3P0C7P0 127 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 RALAP11233 206 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 TYRP14679 529 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 CD19P15391 556 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 TIE1P35590 1138 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 YWHAGP61981 247 aaKnown RBP eCLIP17.6■□□□□ 0.41
DDB1-215ENST00000539712 YWHAEP62258 255 aaKnown RBP17.6■□□□□ 0.41
DDB1-215ENST00000539712 BST2Q10589 180 aaKnown RBP17.6■□□□□ 0.41
DDB1-215ENST00000539712 EFEMP1Q12805 493 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 CSRP2Q16527 193 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 PLK5Q496M5 336 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 RRAGAQ7L523 313 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 IRF2BP1Q8IU81 584 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 PPM1KQ8N3J5 372 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 TSTD1Q8NFU3 115 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 KCTD13Q8WZ19 329 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 DUSP15Q9H1R2 295 aaPredicted RBP17.6■□□□□ 0.41
DDB1-215ENST00000539712 USP18Q9UMW8 372 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
DDB1-215ENST00000539712 ABCA7Q8IZY2 2146 aa17.6■□□□□ 0.41
DDB1-215ENST00000539712 TBC1D3BA6NDS4 549 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 NEDD8-MDP1E9PL57 170 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 CCDC192P0DO97 292 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 DGKEP52429 567 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 GCNT1Q02742 428 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 LMNB2Q03252 620 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 GOLGA8FQ08AF8 430 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 GOLGA8DPQ0D2H9 430 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 PUM1Q14671 1186 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDB1-215ENST00000539712 CNGA2Q16280 664 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 HSF5Q4G112 596 aaPredicted RBP17.59■□□□□ 0.41
DDB1-215ENST00000539712 BTBD8Q5XKL5 378 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 PMF1Q6P1K2 205 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 TPGS1Q6ZTW0 290 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 TOGARAM2Q6ZUX3 1019 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 ERMP1Q7Z2K6 904 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 TADA2BQ86TJ2 420 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 MDGA1Q8NFP4 955 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 LOXL4Q96JB6 756 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 CNOT6LQ96LI5 555 aaKnown RBP17.59■□□□□ 0.41
DDB1-215ENST00000539712 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
DDB1-215ENST00000539712 BBS2Q9BXC9 721 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 MARCH2Q9P0N8 246 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 WDR35Q9P2L0 1181 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 RWDD2AQ9UIY3 292 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 LSM7Q9UK45 103 aaKnown RBP17.59■□□□□ 0.41
DDB1-215ENST00000539712 FBXO10Q9UK96 956 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.59■□□□□ 0.41
DDB1-215ENST00000539712 STARD13Q9Y3M8 1113 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 PCDHB4Q9Y5E5 795 aa17.59■□□□□ 0.41
DDB1-215ENST00000539712 YJEFN3A6XGL0 299 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 PRRT4C9JH25 899 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 E7ENQ6 273 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 EPN2O95208 641 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 AFPP02771 609 aaKnown RBP17.58■□□□□ 0.4
DDB1-215ENST00000539712 SETSIPP0DME0 302 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 SLC8A3P57103 927 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 COG7P83436 770 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 ADIGQ0VDE8 80 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 ANO7Q6IWH7 933 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 SCML4Q8N228 414 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 OLIG1Q8TAK6 271 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 KCNV2Q8TDN2 545 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 INTS2Q9H0H0 1204 aaKnown RBP17.58■□□□□ 0.4
DDB1-215ENST00000539712 ARRDC1-AS1Q9H2J1 176 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 CD248Q9HCU0 757 aa17.58■□□□□ 0.4
DDB1-215ENST00000539712 DNAJC17Q9NVM6 304 aaKnown RBP17.58■□□□□ 0.4
DDB1-215ENST00000539712 HESX1Q9UBX0 185 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms