RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C11orf65Q8NCR3 313 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CPT1CQ8TCG5 803 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ADAMTS17Q8TE56 1095 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 IGFBPL1Q8WX77 278 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ZBTB10Q96DT7 871 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 WDYHV1Q96HA8 205 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF333Q96JL9 665 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TRIB1Q96RU8 372 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TCF25Q9BQ70 676 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 MMTAG2Q9BU76 263 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SSBP3Q9BWW4 388 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 STK31Q9BXU1 1019 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PACSIN1Q9BY11 444 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 LMAN2LQ9H0V9 348 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF768Q9H5H4 540 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CXorf36Q9H7Y0 433 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF287Q9HBT7 754 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SMC4Q9NTJ3 1288 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TERF2IPQ9NYB0 399 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 IL36RNQ9UBH0 155 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ASAP1Q9ULH1 1129 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SSX2IPQ9Y2D8 614 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 HS3ST4Q9Y661 456 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 UBE2QL1A1L167 161 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 DYTNA2CJ06 578 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TTC36A6NLP5 189 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 DBX1A6NMT0 343 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PATE3B3GLJ2 98 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RAB27BO00194 218 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CD3EAPO15446 510 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FOXS1O43638 330 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PRICKLE3O43900 615 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TBC1D4O60343 1298 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CCNT2O60583 730 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 BAIAP3O94812 1187 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CFIP05156 583 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 GJB1P08034 283 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 C1QTNF9P0C862 333 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KCNA2P16389 499 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 AVPR1BP47901 424 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SELENOPP49908 381 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 DGKEP52429 567 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 EFEMP1Q12805 493 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PDLIM3Q53GG5 364 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CCDC157Q569K6 752 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SLC45A4Q5BKX6 768 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FAM182AQ5T1J6 154 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SLC9C2Q5TAH2 1124 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 LIPMQ5VYY2 423 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KRTAP5-11Q6L8G4 156 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RETSATQ6NUM9 610 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TRMT10BQ6PF06 316 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FAM111BQ6SJ93 734 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SLC30A10Q6XR72 485 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SPOCD1Q6ZMY3 1216 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 DPY19L3Q6ZPD9 716 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FAM43BQ6ZT52 329 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TBC1D1Q86TI0 1168 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ADSSL1Q8N142 457 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ESX1Q8N693 406 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 LINC01465Q8N7H1 131 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FAM47BQ8NA70 645 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TXNDC5Q8NBS9 432 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ATRIPQ8WXE1 791 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 FAM168AQ92567 244 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 KCNN1Q92952 543 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 MARS2Q96GW9 593 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 NSMCE3Q96MG7 304 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PABPC3Q9H361 631 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 IL23AQ9NPF7 189 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PRDM8Q9NQV8 689 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TMEM160Q9NX00 188 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SIRT5Q9NXA8 310 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 LRFN1Q9P244 771 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CTTNBP2NLQ9P2B4 639 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 SLC39A10Q9ULF5 831 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TBX20Q9UMR3 447 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 OSGIN2Q9Y236 505 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 EME2A4GXA9 379 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 B4E171 279 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 PROB1E7EW31 1015 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RNASET2O00584 256 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 HOXC11O43248 304 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TRIAP1O43715 76 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RRP9O43818 475 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 B4GALT4O60513 344 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 HEXIM1O94992 359 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 GNAI2P04899 355 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 HNRNPCP07910 306 aaKnown RBP eCLIP1.2□□□□□ -2.224e-7■■■■□ 21.1
HIF1A-204ENST00000539097 HSP90AB1P08238 724 aaKnown RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ZNF8P17098 575 aaPredicted RBP1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CD58P19256 250 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CD72P21854 359 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 ADD2P35612 726 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 TSPAN7P41732 249 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 CHN2P52757 468 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 RABGGTBP53611 331 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 OAZ1P54368 228 aa1.2□□□□□ -2.22
HIF1A-204ENST00000539097 LILRA4P59901 499 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms