RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TSGA10Q9BZW7 698 aa24.57■■□□□ 1.52
TMEM260-202ENST00000538838 MRPS23Q9Y3D9 190 aaKnown RBP24.57■■□□□ 1.52
TMEM260-202ENST00000538838 CLUHO75153 1309 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 MACROD2A1Z1Q3 448 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 ZNF197O14709 1029 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 MDM4O15151 490 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 ZSCAN12O43309 604 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 MTA2O94776 668 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 TBX18O95935 607 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 OAS1P00973 400 aaKnown RBP24.56■■□□□ 1.52
TMEM260-202ENST00000538838 PDGFRAP16234 1089 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 TFE3P19532 575 aaPredicted RBP24.56■■□□□ 1.52
TMEM260-202ENST00000538838 HECTD3Q5T447 861 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 REXO1L1PQ8IX06 675 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 SMRP1Q8NCR6 262 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 DQX1Q8TE96 717 aaKnown RBP24.56■■□□□ 1.52
TMEM260-202ENST00000538838 RNF139Q8WU17 664 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 DDX23Q9BUQ8 820 aaKnown RBP24.56■■□□□ 1.52
TMEM260-202ENST00000538838 CD207Q9UJ71 328 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 PAXBP1Q9Y5B6 917 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 C5orf42Q9H799 3197 aa24.56■■□□□ 1.52
TMEM260-202ENST00000538838 NUP210Q8TEM1 1887 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 KRT86O43790 486 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 KCNA5P22460 613 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 NOS2P35228 1153 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 C15orf59Q2T9L4 293 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 C10orf120Q5SQS8 335 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 OTUD1Q5VV17 481 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 ZNF662Q6ZS27 426 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 CCAR2Q8N163 923 aaKnown RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 C17orf53Q8N3J3 647 aaPredicted RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 ADAM32Q8TC27 787 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 ADAM33Q9BZ11 813 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 WDR6Q9NNW5 1121 aaKnown RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.55■■□□□ 1.52
TMEM260-202ENST00000538838 GUCA1BQ9UMX6 200 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 ZKSCAN5Q9Y2L8 839 aa24.55■■□□□ 1.52
TMEM260-202ENST00000538838 DPYSL4O14531 572 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 CCP110O43303 1012 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 COCHO43405 550 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 FSHRP23945 695 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 SDC4P31431 198 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 SULT1E1P49888 294 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 TUBP50607 506 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 ZNF143P52747 638 aaPredicted RBP24.54■■□□□ 1.52
TMEM260-202ENST00000538838 CCDC14Q49A88 953 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 ARHGAP29Q52LW3 1261 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 ATAT1Q5SQI0 421 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 GPR158Q5T848 1215 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 MSANTD2Q6P1R3 559 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 TAC4Q86UU9 113 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 MAB21L3Q8N8X9 362 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 SLC22A12Q96S37 553 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 NPY6RQ99463 290 aa24.54■■□□□ 1.52
TMEM260-202ENST00000538838 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 PSMA2P25787 234 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 HADHBP55084 474 aaKnown RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 NAP1L1P55209 391 aaKnown RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 ATP11AP98196 1134 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 EFEMP1Q12805 493 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 CDO1Q16878 200 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 GET4Q7L5D6 327 aaPredicted RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 KIAA1524Q8TCG1 905 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 FNIP1Q8TF40 1166 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 RIPOR3Q96MK2 946 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 TBCBQ99426 244 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 SMOC2Q9H3U7 446 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 OLA1Q9NTK5 396 aaKnown RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 SFMBT1Q9UHJ3 866 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 RASAL2Q9UJF2 1139 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 STAP1Q9ULZ2 295 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 PRUNE2Q8WUY3 3088 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 TMEM110-MUSTN1A8MSY1 372 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 MYO1FO00160 1098 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 MOCS3O95396 460 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 PTPN9P43378 593 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 SLC25A52Q3SY17 297 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 ARHGAP15Q53QZ3 475 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 RAB6CQ53S08 254 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 SH3PXD2AQ5TCZ1 1133 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 MIB1Q86YT6 1006 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 ZNF276Q8N554 614 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 ARL14EPQ8N8R7 260 aaPredicted RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 CDK5RAP1Q96SZ6 601 aaKnown RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 NACA2Q9H009 215 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 RNF38Q9H0F5 515 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 RAB6CQ9H0N0 254 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 SLITRK6Q9H5Y7 841 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 FAM204AQ9H8W3 233 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 CALCOCO1Q9P1Z2 691 aa24.53■■□□□ 1.52
TMEM260-202ENST00000538838 USP15Q9Y4E8 981 aaPredicted RBP24.53■■□□□ 1.52
TMEM260-202ENST00000538838 DOCK8Q8NF50 2099 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 SYNJ2BP-COX16A0A087WUM0 186 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 MSI1O43347 362 aaKnown RBP24.52■■□□□ 1.52
TMEM260-202ENST00000538838 OLFM2O95897 454 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 MTHFRP42898 656 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 MESDQ14696 234 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 POTEHQ6S545 545 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 TADA2BQ86TJ2 420 aa24.52■■□□□ 1.52
TMEM260-202ENST00000538838 TPCN2Q8NHX9 752 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms