RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 OSBPL9Q96SU4 736 aa18.02■□□□□ 0.48
CLN6-202ENST00000538696 PSMB7Q99436 277 aa18.02■□□□□ 0.48
CLN6-202ENST00000538696 TUBB2BQ9BVA1 445 aa18.02■□□□□ 0.48
CLN6-202ENST00000538696 WDR6Q9NNW5 1121 aaKnown RBP18.02■□□□□ 0.48
CLN6-202ENST00000538696 OSER1Q9NX31 292 aa18.02■□□□□ 0.48
CLN6-202ENST00000538696 STRIP2Q9ULQ0 834 aa18.02■□□□□ 0.48
CLN6-202ENST00000538696 A0A1W2PRU2 124 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 ZNF840PA6NDX5 716 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 GRXCR2A6NFK2 248 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 GOLGA8SH3BPF8 625 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 ZNF185O15231 689 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
CLN6-202ENST00000538696 FGF19O95750 216 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 SLC6A3Q01959 620 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 ZNF268Q14587 947 aaPredicted RBP18.01■□□□□ 0.47
CLN6-202ENST00000538696 RPS6KA1Q15418 735 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 TAF5Q15542 800 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 WHAMMP3Q1A5X7 153 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 FAM102AQ5T9C2 384 aaPredicted RBP18.01■□□□□ 0.47
CLN6-202ENST00000538696 DNAJC24Q6P3W2 148 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 SLC26A9Q7LBE3 791 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 ITFG1Q8TB96 612 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 COG1Q8WTW3 980 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 SUSD6Q92537 303 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 HLA-CQ95604 372 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 CAPZA3Q96KX2 299 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 GCNAQ96QF7 691 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 TLR8Q9NR97 1041 aaKnown RBP18.01■□□□□ 0.47
CLN6-202ENST00000538696 ASNSD1Q9NWL6 643 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 TRPM5Q9NZQ8 1165 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 WDR35Q9P2L0 1181 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 AMFRQ9UKV5 643 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 USP15Q9Y4E8 981 aaPredicted RBP18.01■□□□□ 0.47
CLN6-202ENST00000538696 SCINQ9Y6U3 715 aa18.01■□□□□ 0.47
CLN6-202ENST00000538696 CEBPBP17676 345 aa18■□□□□ 0.47
CLN6-202ENST00000538696 TCP1P17987 556 aaKnown RBP18■□□□□ 0.47
CLN6-202ENST00000538696 SCNN1AP37088 669 aa18■□□□□ 0.47
CLN6-202ENST00000538696 MTHFRP42898 656 aa18■□□□□ 0.47
CLN6-202ENST00000538696 PPP3CCP48454 512 aa18■□□□□ 0.47
CLN6-202ENST00000538696 SMAD4Q13485 552 aaKnown RBP18■□□□□ 0.47
CLN6-202ENST00000538696 TEAD2Q15562 447 aa18■□□□□ 0.47
CLN6-202ENST00000538696 ATAT1Q5SQI0 421 aa18■□□□□ 0.47
CLN6-202ENST00000538696 STXBP5Q5T5C0 1151 aa18■□□□□ 0.47
CLN6-202ENST00000538696 SNX30Q5VWJ9 437 aa18■□□□□ 0.47
CLN6-202ENST00000538696 MON1AQ86VX9 555 aa18■□□□□ 0.47
CLN6-202ENST00000538696 ARHGAP18Q8N392 663 aa18■□□□□ 0.47
CLN6-202ENST00000538696 C3orf20Q8ND61 904 aa18■□□□□ 0.47
CLN6-202ENST00000538696 KHSRPQ92945 711 aaKnown RBP eCLIP18■□□□□ 0.478e-8■□□□□ 8.3
CLN6-202ENST00000538696 RIPOR3Q96MK2 946 aa18■□□□□ 0.47
CLN6-202ENST00000538696 ATXN3LQ9H3M9 355 aa18■□□□□ 0.47
CLN6-202ENST00000538696 PRDM6Q9NQX0 595 aa18■□□□□ 0.47
CLN6-202ENST00000538696 METTL5Q9NRN9 209 aaKnown RBP18■□□□□ 0.47
CLN6-202ENST00000538696 PARVAQ9NVD7 372 aa18■□□□□ 0.47
CLN6-202ENST00000538696 MRPS23Q9Y3D9 190 aaKnown RBP18■□□□□ 0.47
CLN6-202ENST00000538696 ALG6Q9Y672 507 aa18■□□□□ 0.47
CLN6-202ENST00000538696 ZNF197O14709 1029 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 DDX3YO15523 660 aaKnown RBP17.99■□□□□ 0.47
CLN6-202ENST00000538696 MBTPS2O43462 519 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 DAB1O75553 588 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 GRAP2O75791 330 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 LTFP02788 710 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 FYNP06241 537 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 PRLRP16471 622 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 COMTP21964 271 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 FSHRP23945 695 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 CXCR5P32302 372 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 EFHC1Q5JVL4 640 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 PPP1R15BQ5SWA1 713 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 BSPRYQ5W0U4 402 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 ING5Q8WYH8 240 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 FAM149B1Q96BN6 582 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 HES6Q96HZ4 224 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 SLC2A13Q96QE2 648 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 POMKQ9H5K3 350 aa17.99■□□□□ 0.47
CLN6-202ENST00000538696 MRPL47Q9HD33 250 aaKnown RBP17.99■□□□□ 0.47
CLN6-202ENST00000538696 UQCRHLA0A096LP55 91 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 C2orf78A6NCI8 922 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 PDE2AO00408 941 aaPredicted RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 HSF2BPO75031 334 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 UQCRHP07919 91 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 GLI1P08151 1106 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 PSEN1P49768 467 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 LEXMQ3ZCV2 418 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 BTBD8Q5XKL5 378 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TXNDC8Q6A555 127 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TRNP1Q6NT89 227 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 POTEHQ6S545 545 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 GET4Q7L5D6 327 aaPredicted RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 MNS1Q8NEH6 495 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 JOSD2Q8TAC2 188 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 EDEM1Q92611 657 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 MRPS31Q92665 395 aaKnown RBP17.98■□□□□ 0.47
CLN6-202ENST00000538696 NECTIN4Q96NY8 510 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 MCEEQ96PE7 176 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 SELENOOQ9BVL4 669 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 CCSER2Q9H7U1 834 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.98■□□□□ 0.47
CLN6-202ENST00000538696 CLIC5Q9NZA1 410 aa17.98■□□□□ 0.47
CLN6-202ENST00000538696 TMEM59LQ9UK28 342 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms