RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 UBXN11Q5T124 520 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 FAM109BQ6ICB4 259 aaPredicted RBP9.62□□□□□ -0.87
DDB1-211ENST00000538280 C4orf22Q6V702 233 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SLC26A9Q7LBE3 791 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 MAP7D3Q8IWC1 876 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 FUKQ8N0W3 1084 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 GBP7Q8N8V2 638 aaPredicted RBP9.62□□□□□ -0.87
DDB1-211ENST00000538280 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 FAM71DQ8N9W8 422 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 FBXO36Q8NEA4 188 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PCDH19Q8TAB3 1148 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 GDAP1Q8TB36 358 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 PYROXD1Q8WU10 500 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 KBTBD7Q8WVZ9 684 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 MYLIPQ8WY64 445 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 MAK16Q9BXY0 300 aaKnown RBP9.62□□□□□ -0.87
DDB1-211ENST00000538280 EIF2AQ9BY44 585 aaKnown RBP9.62□□□□□ -0.87
DDB1-211ENST00000538280 CDHR5Q9HBB8 845 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 ABCF3Q9NUQ8 709 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 SETD4Q9NVD3 440 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 GDAP2Q9NXN4 497 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 XPO7Q9UIA9 1087 aaKnown RBP9.62□□□□□ -0.87
DDB1-211ENST00000538280 ATP11BQ9Y2G3 1177 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 TEX264Q9Y6I9 313 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 REV3LO60673 3130 aa9.62□□□□□ -0.87
DDB1-211ENST00000538280 TSC2P49815 1807 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 A0A1W2PPM1 405 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 CFAP73A6NFT4 308 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 APOL1O14791 398 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 RECQL4O94761 1208 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 UBOX5O94941 541 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 ZWINTO95229 277 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 CD4P01730 458 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 FGFR1P11362 822 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 ALADP13716 330 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 SSTR1P30872 391 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 HOXC8P31273 242 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 SDC4P31431 198 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 RGS7P49802 495 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 BCAT1P54687 386 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 NCALDP61601 193 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 MGAT5Q09328 741 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 BST2Q10589 180 aaKnown RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 BNIP1Q12981 228 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 HIC1Q14526 733 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 EFTUD2Q15029 972 aaKnown RBP eCLIP9.61□□□□□ -0.87
DDB1-211ENST00000538280 SLC1A5Q15758 541 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 CA9Q16790 459 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 KIZQ2M2Z5 673 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 ZNF697Q5TEC3 545 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 DARS2Q6PI48 645 aaKnown RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 BNIPLQ7Z465 357 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 DPP9Q86TI2 863 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 ACOT1Q86TX2 421 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 PDIK1LQ8N165 341 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 AGGF1Q8N302 714 aaeCLIP9.61□□□□□ -0.87
DDB1-211ENST00000538280 ZNF276Q8N554 614 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 ANKRD52Q8NB46 1076 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 MAFAQ8NHW3 353 aaPredicted RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 FBF1Q8TES7 1133 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 FAM172AQ8WUF8 416 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 C18orf25Q96B23 403 aaPredicted RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
DDB1-211ENST00000538280 SMC6Q96SB8 1091 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 PAFAH2Q99487 392 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 CALN1Q9BXU9 219 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 KIF9Q9HAQ2 790 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 RXFP1Q9HBX9 757 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 SLC5A4Q9NY91 659 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 GRID1Q9ULK0 1009 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 SNX9Q9Y5X1 595 aa9.61□□□□□ -0.87
DDB1-211ENST00000538280 TRIM43BA6NCK2 446 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 GOLGA8MH3BSY2 632 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 MGRN1O60291 552 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 EDF1O60869 148 aaKnown RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 SPAG7O75391 227 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 GSTA2P09210 222 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 DHRS4L1P0CG22 281 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 ZNF865P0CJ78 1059 aaPredicted RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 CYP2C9P11712 490 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 KRT15P19012 456 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 TPSB2P20231 275 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 LRPAP1P30533 357 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 L1CAMP32004 1257 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 PNPLA4P41247 253 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 ELK3P41970 407 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 SKIV2L2P42285 1042 aaKnown RBP9.6□□□□□ -0.87
DDB1-211ENST00000538280 MAGEA3P43357 314 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 ACADSBP45954 432 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 NRLP54845 237 aa9.6□□□□□ -0.87
DDB1-211ENST00000538280 YWHAZP63104 245 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms