RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 CYP2B6P20813 491 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CNTFP26441 200 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 GCAP28676 217 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 L1CAMP32004 1257 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 SERPINB9P50453 376 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FCGRTP55899 365 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 NKX3-2P78367 333 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 IRX5P78411 483 aaPredicted RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 MRPS5P82675 430 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 ZNF200P98182 395 aaPredicted RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 CCDC15Q0P6D6 951 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 MMRN1Q13201 1228 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 NAB1Q13506 487 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FASTKD3Q14CZ7 662 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 MTFR1Q15390 333 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 TAF5Q15542 800 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 PDK4Q16654 411 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 KCTD19Q17RG1 926 aaPredicted RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 PPP6R3Q5H9R7 873 aaPredicted RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 PRAMEF19Q5SWL8 479 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FNBP1LQ5T0N5 605 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 HHATQ5VTY9 493 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FYB2Q5VWT5 728 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 ANKRD22Q5VYY1 191 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CHADLQ6NUI6 762 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 RGMBQ6NW40 437 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 C1orf228Q6PIY5 440 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 C3orf62Q6ZUJ4 267 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 PRUNE1Q86TP1 453 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 IFNL1Q8IU54 200 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CCNJLQ8IV13 435 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 ANKMY2Q8IV38 441 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 PQLC3Q8N755 202 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 SMG8Q8ND04 991 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 PCDH19Q8TAB3 1148 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 ZNF398Q8TD17 642 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 MGARPQ8TDB4 240 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FBF1Q8TES7 1133 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 TFB1MQ8WVM0 346 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 TMEM40Q8WWA1 233 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CCT6BQ92526 530 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 KHSRPQ92945 711 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP28-206ENST00000538224 NTAN1Q96AB6 310 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 MTBPQ96DY7 904 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 PIWIL1Q96J94 861 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 UROC1Q96N76 676 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 ELAC2Q9BQ52 826 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 NAT9Q9BTE0 207 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 MED10Q9BTT4 135 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 BRD8Q9H0E9 1235 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 DPEP3Q9H4B8 488 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 DHX35Q9H5Z1 703 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 CDHR5Q9HBB8 845 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 USP29Q9HBJ7 922 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 POPDC2Q9HBU9 364 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CNGB3Q9NQW8 809 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 EIF2B3Q9NR50 452 aaKnown RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 FAM105AQ9NUU6 356 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 ETNK2Q9NVF9 386 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 HAUS2Q9NVX0 235 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 FLRT1Q9NZU1 646 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 KLHL14Q9P2G3 628 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 SAE1Q9UBE0 346 aaPredicted RBP6.88□□□□□ -1.31
USP28-206ENST00000538224 DSEQ9UL01 958 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CDH9Q9ULB4 789 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 HEY1Q9Y5J3 304 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 TEX264Q9Y6I9 313 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 CAPN7Q9Y6W3 813 aa6.88□□□□□ -1.31
USP28-206ENST00000538224 NLRC5Q86WI3 1866 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 KBTBD13C9JR72 458 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 GABRDO14764 452 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 SPTLC1O15269 473 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 NCAM2O15394 837 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 MTSS1O43312 755 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 TYROBPO43914 113 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 DCTN3O75935 186 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 ATP5HO75947 161 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 KRT37O76014 449 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 F9P00740 461 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 MT-ND3P03897 115 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 RARBP10826 455 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 ODC1P11926 461 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 CYBAP13498 195 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 IL4RP24394 825 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 RBL1P28749 1068 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 ALDH3A1P30838 453 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 ELK3P41970 407 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 SKIV2L2P42285 1042 aaKnown RBP6.87□□□□□ -1.31
USP28-206ENST00000538224 GPX6P59796 221 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 YWHAGP61981 247 aaKnown RBP eCLIP6.87□□□□□ -1.31
USP28-206ENST00000538224 YWHAZP63104 245 aaKnown RBP6.87□□□□□ -1.31
USP28-206ENST00000538224 BEX3Q00994 111 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 ADIGQ0VDE8 80 aa6.87□□□□□ -1.31
USP28-206ENST00000538224 SCAPQ12770 1279 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms