RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GORASP1Q9BQQ3 440 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 MRPL4Q9BYD3 311 aaKnown RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 KLC2Q9H0B6 622 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 THAP1Q9NVV9 213 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 ZC3H7BQ9UGR2 993 aaKnown RBP12.6□□□□□ -0.39
CPSF7-218ENST00000537641 USP18Q9UMW8 372 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 ANK1P16157 1881 aa12.6□□□□□ -0.39
CPSF7-218ENST00000537641 H7C0C1 242 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 PDLIM1O00151 329 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 OGTO15294 1046 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TOM1L1O75674 476 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 KLHL2O95198 593 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TGM2P21980 687 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 GABRB2P47870 512 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ATP5OP48047 213 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 HIRAP54198 1017 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 SP2Q02086 613 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 STX3Q13277 289 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CAPSQ13938 189 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 HIC1Q14526 733 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 MECRQ9BV79 373 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CALN1Q9BXU9 219 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 S100A14Q9HCY8 104 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 RAB6BQ9NRW1 208 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 PCSK1NQ9UHG2 260 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CYTH4Q9UIA0 394 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 BCLAF3A2AJT9 711 aaKnown RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 FAM159BA6NKW6 160 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 PRR5-ARHGAP8B1AHC4 643 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TNNC2P02585 160 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ERBB2P04626 1255 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CD19P15391 556 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TNFSF9P41273 254 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 EFNA5P52803 228 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ALDH18A1P54886 795 aaKnown RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 IRX4P78413 519 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ARHGAP8P85298 464 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 KDSRQ06136 332 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 MTM1Q13496 603 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 VGLL4Q14135 290 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 LBX2Q6XYB7 198 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 SCARA5Q6ZMJ2 495 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ILDR2Q71H61 639 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 DHDDSQ86SQ9 333 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 PDSS2Q86YH6 399 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 OR6Y1Q8NGX8 325 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 FAM172AQ8WUF8 416 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 USP6NLQ92738 828 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CPXM1Q96SM3 734 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 USP29Q9HBJ7 922 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ETNK2Q9NVF9 386 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 TJP2Q9UDY2 1190 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CPSF3Q9UKF6 684 aaKnown RBP12.59□□□□□ -0.39
CPSF7-218ENST00000537641 ITGA11Q9UKX5 1188 aa12.59□□□□□ -0.39
CPSF7-218ENST00000537641 CXorf49A8MYA2 514 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 MYL4P12829 197 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 GPD1P21695 349 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 CPOXP36551 454 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 ZNF143P52747 638 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 CDH6P55285 790 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 PDK2Q15119 407 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 CNPY1Q3B7I2 92 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 SEZ6Q53EL9 994 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 CES4AQ5XG92 561 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 NPNTQ6UXI9 565 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 MARK2Q7KZI7 788 aaKnown RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 CAND1Q86VP6 1230 aaKnown RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 EMC1Q8N766 993 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 ACMSDQ8TDX5 336 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 ANKRD36BP1Q96IX9 119 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 RILPQ96NA2 401 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 RNF157Q96PX1 679 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 TUBGCP5Q96RT8 1024 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 PEBP4Q96S96 227 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 TTC1Q99614 292 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 SPATA16Q9BXB7 569 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 BCO2Q9BYV7 579 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 GCOM2Q9BZD3 368 aaPredicted RBP12.58□□□□□ -0.4
CPSF7-218ENST00000537641 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.4
CPSF7-218ENST00000537641 XAB2Q9HCS7 855 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms