RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 MLH1P40692 756 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ATXN1P54253 815 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 ADCY1Q08828 1119 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 CBLBQ13191 982 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 SLC45A4Q5BKX6 768 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MDH1BQ5I0G3 518 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 CXCL17Q6UXB2 119 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 PSTKQ8IV42 348 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 DEFB106AQ8N104 65 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 SIX6OS1Q8N1H7 587 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 TMEM86AQ8N2M4 240 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 CCDC185Q8N715 623 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MRRFQ96E11 262 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 CSPG4P5Q96PW8 444 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 DHRS4Q9BTZ2 278 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ADAM33Q9BZ11 813 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 SENP6Q9GZR1 1112 aaPredicted RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 PRDM16Q9HAZ2 1276 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 RCOR3Q9P2K3 495 aaPredicted RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 FAM200BP0CF97 657 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ARL4AP40617 200 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 ELK3P41970 407 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MSH2P43246 934 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MAGEA6P43360 314 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 EFTUD2Q15029 972 aaKnown RBP eCLIP16.26■□□□□ 0.192e-7■■□□□ 14.1
MKS1-204ENST00000537529 GDF6Q6KF10 455 aaPredicted RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 SENP8Q96LD8 212 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
MKS1-204ENST00000537529 PAFAH2Q99487 392 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 KDM4CQ9H3R0 1056 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 SSU72Q9NP77 194 aaKnown RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 ETNK2Q9NVF9 386 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 FGFR1OP2Q9NVK5 253 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 MTMR10Q9NXD2 777 aa16.26■□□□□ 0.19
MKS1-204ENST00000537529 TRIP12Q14669 1992 aaPredicted RBP16.26■□□□□ 0.19
MKS1-204ENST00000537529 CCT8L1PA6NM43 557 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CLDN5O00501 218 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 SNX3O60493 162 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 SPAG7O75391 227 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 THP07101 528 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CTSHP09668 335 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CTGFP29279 349 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 LHX1P48742 406 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 FCGRTP55899 365 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 YWHAZP63104 245 aaKnown RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 ACTN3Q08043 901 aaPredicted RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 LACTB2Q53H82 288 aaPredicted RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 NUGGCQ68CJ6 796 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 ADGRD1Q6QNK2 874 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 GAD1Q99259 594 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CYTH2Q99418 400 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 KRT82Q9NSB4 513 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 DDX43Q9NXZ2 648 aaKnown RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 FZD10Q9ULW2 581 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 STAP1Q9ULZ2 295 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 TEX264Q9Y6I9 313 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 GHRP10912 638 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 NOS2P35228 1153 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 GBE1Q04446 702 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 SPARCL1Q14515 664 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CLEC20AQ6ZU45 233 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 PAQR9Q6ZVX9 377 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 SERINC5Q86VE9 423 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 FAM131BQ86XD5 332 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 CCT6BQ92526 530 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 SYT15Q9BQS2 421 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 OSBPL7Q9BZF2 842 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 GIT1Q9Y2X7 761 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 USP15Q9Y4E8 981 aaPredicted RBP16.25■□□□□ 0.19
MKS1-204ENST00000537529 CAPN7Q9Y6W3 813 aa16.25■□□□□ 0.19
MKS1-204ENST00000537529 MEIS3P2A8K0S8 358 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 GPR182O15218 404 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 GCATO75600 419 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 FBXO21O94952 628 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 MAP3K6O95382 1288 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 PGK1P00558 417 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.19
MKS1-204ENST00000537529 MTM1Q13496 603 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
MKS1-204ENST00000537529 DCAF6Q58WW2 860 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 DSTYKQ6XUX3 929 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 BZW1Q7L1Q6 419 aaKnown RBP16.24■□□□□ 0.19
MKS1-204ENST00000537529 C4orf33Q8N1A6 199 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 DENND1AQ8TEH3 1009 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 KIF9Q9HAQ2 790 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
MKS1-204ENST00000537529 HACD1B0YJ81 288 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 H0YHG0 523 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 H3BRJ5 948 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 SUN1O94901 812 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 ASMTLO95671 621 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 CHRNA1P02708 482 aa16.23■□□□□ 0.19
MKS1-204ENST00000537529 CA4P22748 312 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms