RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 GNG14A0A1W2PPG7 69 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FAM25AB3EWG3 89 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FAM25CB3EWG5 89 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FAM25GB3EWG6 89 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 ACO1P21399 889 aaKnown RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 YWHAQP27348 245 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 RFX5P48382 616 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CCT8P50990 548 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 OTUD4Q01804 1114 aaKnown RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FAXCQ5TGI0 409 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 PRMT9Q6P2P2 845 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 APBB2Q92870 758 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TMEM169Q96HH4 297 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 ELOVL6Q9H5J4 265 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CNGB3Q9NQW8 809 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 ABI2Q9NYB9 513 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 COPG2Q9UBF2 871 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 POLG2Q9UHN1 485 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TAGLN3Q9UI15 199 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FAM205CA6NFA0 338 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CYP19A1P11511 503 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CYP11B2P19099 503 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 YWHAZP63104 245 aaKnown RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CYP4A22Q5TCH4 519 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 BNIPLQ7Z465 357 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FBXL16Q8N461 479 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FBXO36Q8NEA4 188 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CHST13Q8NET6 341 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 RMND5BQ96G75 393 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 HAO1Q9UJM8 370 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 KLHL20Q9Y2M5 609 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 DDHD2O94830 711 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 MED26O95402 600 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 CRTAMO95727 393 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 JAK1P23458 1154 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 FXR2P51116 673 aaKnown RBP eCLIP10.95□□□□□ -0.662e-6■■■■■ 27.8
CLIP1-209ENST00000537178 ATP12AP54707 1039 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TMEM62Q0P6H9 643 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 ZCCHC8Q6NZY4 707 aaKnown RBP10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TMC5Q6UXY8 1006 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 MACC1Q6ZN28 852 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 SLC26A11Q86WA9 606 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 WHRNQ9P202 907 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
CLIP1-209ENST00000537178 TMEM114B3SHH9 223 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 SNPHO15079 494 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 FEN1P39748 380 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 PSMC6P62333 389 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 ILF2Q12905 390 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 TRAF2Q12933 501 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 DGKDQ16760 1214 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 TRMT5Q32P41 509 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 FAM117BQ6P1L5 589 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 STOX1Q6ZVD7 989 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 MRPS31Q92665 395 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 VMP1Q96GC9 406 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 PI4K2AQ9BTU6 479 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 KLHL4Q9C0H6 718 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 INTS13Q9NVM9 706 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 DNAJC16Q9Y2G8 782 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 FLT1P17948 1338 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 RNASEH1O60930 286 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 CPSF4O95639 269 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 KRT6AP02538 564 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 KRT6BP04259 564 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 ITGB3P05106 788 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 ZCCHC18P0CG32 403 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 HSMCR30P0CW71 290 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 MAGEA10P43363 369 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 KRT6CP48668 564 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 MCL1Q07820 350 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 TRIQKQ629K1 86 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 NT5DC4Q86YG4 428 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 ZCCHC7Q8N3Z6 543 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 LRRC71Q8N4P6 559 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 SVOPQ8N4V2 548 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 IGDCC4Q8TDY8 1250 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 MAGED4Q96JG8 741 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 RNPEPQ9H4A4 650 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 RAD21L1Q9H4I0 556 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 RPRD1BQ9NQG5 326 aaKnown RBP10.94□□□□□ -0.66
CLIP1-209ENST00000537178 COMMD8Q9NX08 183 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 OGTO15294 1046 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 AP1G2O75843 785 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 NPTXRO95502 500 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 EGFRP00533 1210 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 VDRP11473 427 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 AQP5P55064 265 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 OXCT1P55809 520 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 ITGA1P56199 1179 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 VAC14Q08AM6 782 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 DENND5BQ6ZUT9 1274 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 MOSPD2Q8NHP6 518 aa10.94□□□□□ -0.66
CLIP1-209ENST00000537178 CEP44Q9C0F1 390 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms