RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 DGKBQ9Y6T7 804 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZNF541Q9H0D2 1346 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GOLGA8SH3BPF8 625 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GOLGA8MH3BSY2 632 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ENPP3O14638 875 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 HOXC11O43248 304 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 SULT1C4O75897 302 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CLIC3O95833 236 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TP53P04637 393 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 PTPN1P18031 435 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 KRT4P19013 534 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 VAMP1P23763 118 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 KRT2P35908 639 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PPARGP37231 505 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ACADSBP45954 432 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 IFITM3Q01628 133 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TAGLNQ01995 201 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 GBE1Q04446 702 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ALCAMQ13740 583 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 HSP90AA5PQ58FG0 334 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PPM1LQ5SGD2 360 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CES4AQ5XG92 561 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZNF746Q6NUN9 644 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 CYP20A1Q6UW02 462 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 KSR2Q6VAB6 950 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CTU1Q7Z7A3 348 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 SETD3Q86TU7 594 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZC3H7AQ8IWR0 971 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 THNSL1Q8IYQ7 743 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZNF34Q8IZ26 560 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PARP8Q8N3A8 854 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 CPSF7Q8N684 471 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 FLCNQ8NFG4 579 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 TSPAN14Q8NG11 270 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 OR2T3Q8NH03 318 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 WASF1Q92558 559 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GPKOWQ92917 476 aaPredicted RBP eCLIP3.86□□□□□ -1.79
MCF2-210ENST00000536274 EME1Q96AY2 570 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ELMO3Q96BJ8 720 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ISOC1Q96CN7 298 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 EBF4Q9BQW3 602 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 HEMGNQ9BXL5 484 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 MRPS26Q9BYN8 205 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 STMN4Q9H169 189 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 EPB41L1Q9H4G0 881 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RPAP3Q9H6T3 665 aaPredicted RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 C17orf75Q9HAS0 396 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 AS3MTQ9HBK9 375 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZNF304Q9HCX3 659 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PLSCR3Q9NRY6 295 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 GIMAP4Q9NUV9 329 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
MCF2-210ENST00000536274 ANAPC5Q9UJX4 755 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PRR12Q9ULL5 1215 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 ARHGAP26Q9UNA1 814 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RNF11Q9Y3C5 154 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RABGAP1Q9Y3P9 1069 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 PPP2R3BQ9Y5P8 575 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 FAM205AQ6ZU69 1335 aa3.86□□□□□ -1.79
MCF2-210ENST00000536274 RBAK-RBAKDNI3L0D1 243 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TRAF5O00463 557 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 GIPC1O14908 333 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 LILRB3O75022 631 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TM7SF2O76062 418 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 FARP2O94887 1054 aaPredicted RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 PROCP04070 461 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TGFB3P10600 412 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 DBTP11182 482 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 IFI30P13284 250 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ICAM2P13598 275 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PDE6AP16499 860 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 IFNAR1P17181 557 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 EIF2AK2P19525 551 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 HMOX2P30519 316 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ATICP31939 592 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 YAP1P46937 504 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 COPZ1P61923 177 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RPS6P62753 249 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 FKBP1AP62942 108 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 PHC1P78364 1004 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 IRX4P78413 519 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 MRPS22P82650 360 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 PRR20EP86478 221 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PRR20CP86479 221 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PRR20DP86480 221 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PRR20BP86481 221 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PRR20AP86496 221 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ATP2C1P98194 919 aaPredicted RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 KRT17Q04695 432 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 NPY5RQ15761 445 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 PDK4Q16654 411 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 MAN2A1Q16706 1144 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RGS21Q2M5E4 152 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 IQSEC1Q6DN90 963 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 TWF2Q6IBS0 349 aaKnown RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 SDE2Q6IQ49 451 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 RSBN1LQ6PCB5 846 aaPredicted RBP3.85□□□□□ -1.79
MCF2-210ENST00000536274 BTNL9Q6UXG8 535 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 IRF2BP2Q7Z5L9 587 aa3.85□□□□□ -1.79
MCF2-210ENST00000536274 ITIH5Q86UX2 942 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms