RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 HHLA1C9JL84 531 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 NEDD8-MDP1E9PL57 170 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 GREM1O60565 184 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 RALAP11233 206 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 RARGP13631 454 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 KIF11P52732 1056 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 EDRF1Q3B7T1 1238 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 C10orf120Q5SQS8 335 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 ZNF658Q5TYW1 1059 aaPredicted RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 RLN3Q8WXF3 142 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 PIGKQ92643 395 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 WBP2Q969T9 261 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 HEXIM2Q96MH2 286 aaKnown RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 DUSP16Q9BY84 665 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCND1-202ENST00000535993 OSER1Q9NX31 292 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 MARK1Q9P0L2 795 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 HOOK1Q9UJC3 728 aaKnown RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 NAGPAQ9UK23 515 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 ANGPTL2Q9UKU9 493 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 ZNF510Q9Y2H8 683 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 STARD13Q9Y3M8 1113 aa12.83□□□□□ -0.36
CCND1-202ENST00000535993 MYO18AQ92614 2054 aaKnown RBP12.83□□□□□ -0.36
CCND1-202ENST00000535993 LNP1A1A4G5 178 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 CETN3O15182 167 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 CACNG3O60359 315 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 KCNK5O95279 499 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 SMC2O95347 1197 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 EPB41P11171 864 aaKnown RBP12.82□□□□□ -0.36
CCND1-202ENST00000535993 TYRP14679 529 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 NTSR1P30989 418 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 MXI1P50539 228 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 SLC8A3P57103 927 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 LMAN2Q12907 356 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 MAP7D1Q3KQU3 841 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 PPP1R26Q5T8A7 1209 aaPredicted RBP12.82□□□□□ -0.36
CCND1-202ENST00000535993 TPGS1Q6ZTW0 290 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 CCDC186Q7Z3E2 898 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 SMYD4Q8IYR2 804 aaPredicted RBP12.82□□□□□ -0.36
CCND1-202ENST00000535993 ZNF276Q8N554 614 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 FBXL13Q8NEE6 735 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 SMARCE1Q969G3 411 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 GTPBP4Q9BZE4 634 aaKnown RBP12.82□□□□□ -0.36
CCND1-202ENST00000535993 UBXN6Q9BZV1 441 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 NMUR1Q9HB89 426 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 ZDHHC4Q9NPG8 344 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 TMEM9BQ9NQ34 198 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 CLIC5Q9NZA1 410 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 EVLQ9UI08 416 aaPredicted RBP12.82□□□□□ -0.36
CCND1-202ENST00000535993 KIAA1549LQ6ZVL6 1849 aa12.82□□□□□ -0.36
CCND1-202ENST00000535993 MYH10P35580 1976 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 MAP1BP46821 2468 aaKnown RBP12.81□□□□□ -0.36
CCND1-202ENST00000535993 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 AP5Z1O43299 807 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 HOXB2P14652 356 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 BMP6P22004 513 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 PMLP29590 882 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 PRCPP42785 496 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 COG7P83436 770 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 ZNF394Q53GI3 561 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 LYSMD4Q5XG99 296 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 SLC36A4Q6YBV0 504 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 SYT12Q8IV01 421 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 TMEFF1Q8IYR6 380 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 CHPFQ8IZ52 775 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 ARHGAP18Q8N392 663 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 TMEM176AQ96HP8 235 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 TSG101Q99816 390 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 NUSAP1Q9BXS6 441 aaKnown RBP12.81□□□□□ -0.36
CCND1-202ENST00000535993 CISHQ9NSE2 258 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 RAB20Q9NX57 234 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 MBD1Q9UIS9 605 aaPredicted RBP12.81□□□□□ -0.36
CCND1-202ENST00000535993 NUDT5Q9UKK9 219 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 USP3Q9Y6I4 520 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
CCND1-202ENST00000535993 MDM4O15151 490 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 TRIM24O15164 1050 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 SLC16A3O15427 465 aaKnown RBP12.8□□□□□ -0.36
CCND1-202ENST00000535993 ZNF217O75362 1048 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 HOXD12P35452 270 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 CHKAP35790 457 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 DGKGP49619 791 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 NOVA1P51513 510 aaKnown RBP12.8□□□□□ -0.36
CCND1-202ENST00000535993 IRX4P78413 519 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 TRIM61Q5EBN2 209 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 EGFLAMQ63HQ2 1017 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 PSAPL1Q6NUJ1 521 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 Q6ZNB5 142 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 ARMCX6Q7L4S7 300 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 SCD5Q86SK9 330 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 MIB1Q86YT6 1006 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 ZC3H3Q8IXZ2 948 aaKnown RBP12.8□□□□□ -0.36
CCND1-202ENST00000535993 SEMA4DQ92854 862 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 DCLK3Q9C098 648 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 LMBRD1Q9NUN5 540 aa12.8□□□□□ -0.36
CCND1-202ENST00000535993 MAN1B1Q9UKM7 699 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms