RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 FGF13Q92913 245 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 DDX23Q9BUQ8 820 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 OLA1Q9NTK5 396 aaKnown RBP16.29■□□□□ 0.2
CNN1-202ENST00000535659 CTTNBP2NLQ9P2B4 639 aa16.29■□□□□ 0.2
CNN1-202ENST00000535659 ZNF638Q14966 1978 aaKnown RBP16.28■□□□□ 0.2
CNN1-202ENST00000535659 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 TRAV19A0A0A6YYK7 116 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 RCCD1A6NED2 376 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 COCHO43405 550 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 PDGFRAP16234 1089 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 FLT3P36888 993 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 TCEAL1Q15170 157 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 PUS10Q3MIT2 529 aaKnown RBP16.28■□□□□ 0.2
CNN1-202ENST00000535659 POTEHQ6S545 545 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 GET4Q7L5D6 327 aaPredicted RBP16.28■□□□□ 0.2
CNN1-202ENST00000535659 SLC35G2Q8TBE7 412 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 RXFP2Q8WXD0 754 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 ZSWIM3Q96MP5 696 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 MCEEQ96PE7 176 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 SLC22A12Q96S37 553 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 NUP85Q9BW27 656 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 NACA2Q9H009 215 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 SLITRK6Q9H5Y7 841 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 RRN3Q9NYV6 651 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 GDE1Q9NZC3 331 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 UVRAGQ9P2Y5 699 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 DNMT3LQ9UJW3 386 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 CDH7Q9ULB5 785 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 TFR2Q9UP52 801 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 DOCK6Q96HP0 2047 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 NOTCH4Q99466 2003 aa16.28■□□□□ 0.2
CNN1-202ENST00000535659 C2orf16Q68DN1 1984 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 C5orf42Q9H799 3197 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 C2CD4BA6NLJ0 364 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 PJA2O43164 708 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 OLFM2O95897 454 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 CCDC175P0C221 793 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 EFEMP1Q12805 493 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 KIF5AQ12840 1032 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 TRNP1Q6NT89 227 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 NPAS3Q8IXF0 933 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 RHOT2Q8IXI1 618 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 CMTM8Q8IZV2 173 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 NT5C3BQ969T7 300 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 PRDM6Q9NQX0 595 aa16.27■□□□□ 0.2
CNN1-202ENST00000535659 BRWD1Q9NSI6 2320 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 GPD1P21695 349 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 WEE1P30291 646 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 SDC4P31431 198 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 AVPR1AP37288 418 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 TFF2Q03403 129 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 SMAD2Q15796 467 aaKnown RBP16.26■□□□□ 0.19
CNN1-202ENST00000535659 SLC25A52Q3SY17 297 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 CCDC14Q49A88 953 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 DQX1Q8TE96 717 aaKnown RBP16.26■□□□□ 0.19
CNN1-202ENST00000535659 RFFLQ8WZ73 363 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 CFAP57Q96MR6 1250 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 NPY6RQ99463 290 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 LACRTQ9GZZ8 138 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 MARCH2Q9P0N8 246 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 SFMBT1Q9UHJ3 866 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 STAP1Q9ULZ2 295 aa16.26■□□□□ 0.19
CNN1-202ENST00000535659 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
CNN1-202ENST00000535659 A0A0A6YYK5 440 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 BTNL10A8MVZ5 291 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 MDM4O15151 490 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 TRUB2O95900 331 aaKnown RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 CKMP06732 381 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 LAMP2P13473 410 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 GBP1P32455 592 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 GBP2P32456 591 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 PTPN9P43378 593 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 ZNF143P52747 638 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 SLC7A9P82251 487 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 PTCRAQ6ISU1 281 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 OTOP3Q7RTS5 596 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 ARID3BQ8IVW6 561 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 ZNF564Q8TBZ8 553 aaPredicted RBP16.25■□□□□ 0.19
CNN1-202ENST00000535659 FNIP1Q8TF40 1166 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 MYADMQ96S97 322 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 CNPY3Q9BT09 278 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 OSGEPQ9NPF4 335 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 RASAL2Q9UJF2 1139 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 FAM50BQ9Y247 325 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 USTQ9Y2C2 406 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 PPP2R2CQ9Y2T4 447 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
CNN1-202ENST00000535659 M0QYT0 321 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 MYO1FO00160 1098 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 MTA2O94776 668 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 ENDOD1O94919 500 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 F9P00740 461 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 NOP2P46087 812 aaKnown RBP16.24■□□□□ 0.19
CNN1-202ENST00000535659 SULT1E1P49888 294 aa16.24■□□□□ 0.19
CNN1-202ENST00000535659 KPNA1P52294 538 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms