RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 DUOXA1Q1HG43 343 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 N4BP2L1Q5TBK1 243 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 TMEM92Q6UXU6 159 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 C12orf40Q86WS4 652 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 TMEM25Q86YD3 366 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 CCDC117Q8IWD4 279 aaPredicted RBP13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 PLEKHO2Q8TD55 490 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 TAS1R2Q8TE23 839 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 RLN3Q8WXF3 142 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 DUSP16Q9BY84 665 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 OLA1Q9NTK5 396 aaKnown RBP13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 TMEM30AQ9NV96 361 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 CLIC5Q9NZA1 410 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 HPSEQ9Y251 543 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 GREB1Q4ZG55 1949 aa13.93□□□□□ -0.18
CLSTN3-205ENST00000535452 A0A1W2PQH9 124 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 GFRA2O00451 464 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 CACNG3O60359 315 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 CILPO75339 1184 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 BEST1O76090 585 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF202O95125 648 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ACADMP11310 421 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 CEACAM1P13688 526 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 BCKDHBP21953 392 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 WASP42768 502 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 KIR2DL1P43626 348 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 HARS2P49590 506 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF132P52740 706 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF252P-AS1Q0IIN9 211 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 PKP1Q13835 747 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 WDR45BQ5MNZ6 344 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 SH3PXD2AQ5TCZ1 1133 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 EMC10Q5UCC4 262 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 KIAA1324Q6UXG2 1013 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 PAQR9Q6ZVX9 377 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 BHMTQ93088 406 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 TMEM176AQ96HP8 235 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 GTPBP2Q9BX10 602 aaKnown RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 KLF16Q9BXK1 252 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 MARK1Q9P0L2 795 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 STARD13Q9Y3M8 1113 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ANAPC1Q9H1A4 1944 aa13.92□□□□□ -0.18
CLSTN3-205ENST00000535452 ATG2BQ96BY7 2078 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 TYW5A2RUC4 315 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 OPHN1O60890 802 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 TBX18O95935 607 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 CD19P15391 556 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 CSRP1P21291 193 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 PPP1R2P41236 205 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 KIF11P52732 1056 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF445P59923 1031 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 EFEMP1Q12805 493 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 DPYDQ12882 1025 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 FOXC1Q12948 553 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 HNRNPDQ14103 355 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 GAB4Q2WGN9 574 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 ETFBKMTQ8IXQ9 262 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 ZMIZ2Q8NF64 920 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 OLIG1Q8TAK6 271 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 IPO4Q8TEX9 1081 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 DDI1Q8WTU0 396 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 ELMO3Q96BJ8 720 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 ZFRQ96KR1 1074 aaKnown RBP13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 CALCOCO1Q9P1Z2 691 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 SLC6A14Q9UN76 642 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 PTPRDP23468 1912 aa13.91□□□□□ -0.18
CLSTN3-205ENST00000535452 SPAG17Q6Q759 2223 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 MEI4A8MW99 385 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 SLC16A3O15427 465 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 HMBSP08397 361 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 IRX4P78413 519 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 FKBP3Q00688 224 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF33AQ06730 810 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 SGO2Q562F6 1265 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 ANKS1BQ7Z6G8 1248 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 SMARCE1Q969G3 411 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 PLD4Q96BZ4 506 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 UBXN6Q9BZV1 441 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 METTL14Q9HCE5 456 aaKnown RBP13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 ZDHHC4Q9NPG8 344 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 CISHQ9NSE2 258 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 MARCH2Q9P0N8 246 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 CYP8B1Q9UNU6 501 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 PCDHB9Q9Y5E1 797 aa13.9□□□□□ -0.18
CLSTN3-205ENST00000535452 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 PSMA7O14818 248 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 TIMM44O43615 452 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ADAM23O75077 832 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 PRR29P0C7W0 189 aa13.89□□□□□ -0.19
CLSTN3-205ENST00000535452 ENGP17813 658 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms