RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 HTR3DQ70Z44 454 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 CACNA2D4Q7Z3S7 1137 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 RALGPS2Q86X27 583 aaPredicted RBP23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 ZNF677Q86XU0 584 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 CPA6Q8N4T0 437 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 TMEM35BQ8NCS4 154 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 FAM3CQ92520 227 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 CHFRQ96EP1 664 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 NOX5Q96PH1 765 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 PDCL3Q9H2J4 239 aa23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 OLA1Q9NTK5 396 aaKnown RBP23.79■■□□□ 1.4
SFSWAP-204ENST00000535399 FAM170BA6NMN3 283 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 STC2O76061 302 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 FYNP06241 537 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 FMO1Q01740 532 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 CDR2Q01850 454 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 GOLGA8FQ08AF8 430 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 GOLGA8DPQ0D2H9 430 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 UBXN2BQ14CS0 331 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 BBS7Q8IWZ6 715 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 ADGRG2Q8IZP9 1017 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 RNF139Q8WU17 664 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 OSBPL6Q9BZF3 934 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 TTYH3Q9C0H2 523 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 IFNKQ9P0W0 207 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 TBC1D14Q9P2M4 693 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 STRIP2Q9ULQ0 834 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 SIT1Q9Y3P8 196 aa23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 HELZP42694 1942 aaKnown RBP23.78■■□□□ 1.4
SFSWAP-204ENST00000535399 TICRRQ7Z2Z1 1910 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 SLC12A8A0AV02 714 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 NFATC1O95644 943 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 LSM8O95777 96 aaKnown RBP23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 ERBB2P04626 1255 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 COG7P83436 770 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 C1orf228Q6PIY5 440 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 BEND5Q7L4P6 421 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 CCDC105Q8IYK2 499 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 RNF214Q8ND24 703 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 GOLGA1Q92805 767 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 OTUB2Q96DC9 234 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 PIWIL1Q96J94 861 aaKnown RBP23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 NELL2Q99435 816 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 SFMBT1Q9UHJ3 866 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 MYO6Q9UM54 1294 aa23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 MRPS17Q9Y2R5 130 aaKnown RBP23.77■■□□□ 1.4
SFSWAP-204ENST00000535399 CYP17A1P05093 508 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 DCNP07585 359 aaKnown RBP23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 HMBSP08397 361 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 GJA4P35212 333 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 NOMO3P69849 1222 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 ARID5AQ03989 594 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 FZD5Q13467 585 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 DHCR24Q15392 516 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 GAB4Q2WGN9 574 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 Q6ZNB5 142 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 FMNL3Q8IVF7 1028 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 FAM149B1Q96BN6 582 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 DLGAP2Q9P1A6 1054 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 LSM7Q9UK45 103 aaKnown RBP23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 NDRG2Q9UN36 371 aaKnown RBP23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 ZNF318Q5VUA4 2279 aa23.76■■□□□ 1.39
SFSWAP-204ENST00000535399 KLKB1P03952 638 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 TAF5Q15542 800 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 TRIP4Q15650 581 aaPredicted RBP23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 FIGNQ5HY92 759 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 NAA35Q5VZE5 725 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 RHBDF2Q6PJF5 856 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 OLFML1Q6UWY5 402 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 FAM183BPQ6ZVS7 135 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 IPO4Q8TEX9 1081 aaKnown RBP23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 EDEM3Q9BZQ6 932 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 NAALADL1Q9UQQ1 740 aa23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 HBS1LQ9Y450 684 aaKnown RBP23.75■■□□□ 1.39
SFSWAP-204ENST00000535399 CYP1A1P04798 512 aaPredicted RBP23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 NCAM1P13591 858 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 FERP16591 822 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 GABRB2P47870 512 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 SNX16P57768 344 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 NR1H3Q13133 447 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 NAIF1Q69YI7 327 aaPredicted RBP23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 OR6B2Q6IFH4 312 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 IRF2BP2Q7Z5L9 587 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 CLDN23Q96B33 292 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 PCDHB18PQ96TA0 734 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 ASNSD1Q9NWL6 643 aa23.74■■□□□ 1.39
SFSWAP-204ENST00000535399 FAM170AA1A519 330 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 LRRC53A6NM62 1247 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 MSI1O43347 362 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 GLI1P08151 1106 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 CORO1AP31146 461 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 YWHAZP63104 245 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 PON2Q15165 354 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 LY6G5CQ5SRR4 150 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 TRIM72Q6ZMU5 477 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 ERICH1Q86X53 443 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 DQX1Q8TE96 717 aaKnown RBP23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 CPA5Q8WXQ8 436 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 PLD4Q96BZ4 506 aa23.73■■□□□ 1.39
SFSWAP-204ENST00000535399 TRIM62Q9BVG3 475 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms