RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ACOT9Q9Y305 439 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 QRICH2Q9H0J4 1663 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 PDHXO00330 501 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 IGF2BP3O00425 579 aaKnown RBP eCLIP18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 PQBP1O60828 265 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CNTFP26441 200 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CSHL1Q14406 222 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 C16orf72Q14CZ0 275 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 NBPF12Q5TAG4 269 aaPredicted RBP18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 MRPL48Q96GC5 212 aaKnown RBP18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 EHD4Q9H223 541 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
SFSWAP-203ENST00000535236 A0A087X0T9 212 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 NCAM2O15394 837 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 FAM228BP0C875 321 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 GTF2E2P29084 291 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 TRMT11Q7Z4G4 463 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 PTAR1Q7Z6K3 402 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 WHRNQ9P202 907 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 UBTFL6P0CB48 400 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 FGFR2P21802 821 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 POU1F1P28069 291 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 ATP8B4Q8TF62 1192 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 CNBD2Q96M20 576 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 DEPDC7Q96QD5 511 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 ACTR8Q9H981 624 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 GPRC5DQ9NZD1 345 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 CCNG1P51959 295 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 MCL1Q07820 350 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 MMRN1Q13201 1228 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 CYLC2Q14093 348 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 MDM1Q8TC05 714 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 CASKIN2Q8WXE0 1202 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 PPP1R10Q96QC0 940 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 PABPC3Q9H361 631 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 ZNF682O95780 498 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 BTG3Q14201 252 aaPredicted RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 MARC1Q5VT66 337 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 RD3Q7Z3Z2 195 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 GANQ9H2C0 597 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 PAPOLBQ9NRJ5 636 aaKnown RBP18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 TRPC4Q9UBN4 977 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 KANSL1LA0AUZ9 987 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 E9PBE3 544 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 GZMAP12544 262 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 YWHAQP27348 245 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 TBX4P57082 545 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 ZNF544Q6NX49 715 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 ZNF786Q8N393 782 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 DNAJB3Q8WWF6 145 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 SH3GL1Q99961 368 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 RBM22Q9NW64 420 aaKnown RBP eCLIP18.68■□□□□ 0.585e-11■■■■■ 35.9
SFSWAP-203ENST00000535236 STMN3Q9NZ72 180 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 HEY2Q9UBP5 337 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 PLAGL2Q9UPG8 496 aa18.68■□□□□ 0.58
SFSWAP-203ENST00000535236 NR5A2O00482 541 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 EIF2S1P05198 315 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 CYP2F1P24903 491 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 MTA1Q13330 715 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 TAS1R2Q8TE23 839 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 PRRG3Q9BZD7 231 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 TMEM39AQ9NV64 488 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 TIMM13Q9Y5L4 95 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 CYP2A7P20853 494 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 RRM1P23921 792 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 EMC1Q8N766 993 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 COLGALT1Q8NBJ5 622 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 SYTL5Q8TDW5 730 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 PDCD2LQ9BRP1 358 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 NLNQ9BYT8 704 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 AHSPQ9NZD4 102 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 PROSCO94903 275 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 INSRRP14616 1297 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 TARSP26639 723 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 MPP3Q13368 585 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 LY6KQ17RY6 165 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 SHROOM1Q2M3G4 852 aaPredicted RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 C11orf63Q6NUN7 778 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 NOA1Q8NC60 698 aaKnown RBP18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 MAGED4Q96JG8 741 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 ACOX2Q99424 681 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 MTFR1LQ9H019 292 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 PDZK1P1A8MUH7 402 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 CYP7B1O75881 506 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 SERPINF2P08697 491 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 GYS1P13807 737 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 PTPN3P26045 913 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 RANBP1P43487 201 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 SEC24CP53992 1094 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 ZNF720Q7Z2F6 126 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 EXD1Q8NHP7 514 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 TMEM121Q9BTD3 319 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 ARMC7Q9H6L4 198 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 UBP1Q9NZI7 540 aa18.67■□□□□ 0.58
SFSWAP-203ENST00000535236 SLCO1B7G3V0H7 640 aa18.66■□□□□ 0.58
SFSWAP-203ENST00000535236 TSPAN3O60637 253 aa18.66■□□□□ 0.58
SFSWAP-203ENST00000535236 AMHP03971 560 aa18.66■□□□□ 0.58
SFSWAP-203ENST00000535236 TPBGLP0DKB5 382 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms