RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 SAE1Q9UBE0 346 aaPredicted RBP13.93□□□□□ -0.18
BEST1-208ENST00000534553 FZD10Q9ULW2 581 aa13.93□□□□□ -0.18
BEST1-208ENST00000534553 TIMM13Q9Y5L4 95 aaPredicted RBP13.93□□□□□ -0.18
BEST1-208ENST00000534553 H3BRJ5 948 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 BEST1O76090 585 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PARNO95453 639 aaKnown RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 ZBED1O96006 694 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 TSHRP16473 764 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 MAGEA4P43358 317 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 CTCFP49711 727 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 CDK7P50613 346 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 ARL4CP56559 192 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PPP2R2AP63151 447 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PPP6R3Q5H9R7 873 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 EFHC2Q5JST6 749 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PQLC3Q8N755 202 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 GLIS1Q8NBF1 620 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PRCCQ92733 491 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 FAM193BQ96PV7 902 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 PKMYT1Q99640 499 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 RTP3Q9BQQ7 232 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 NINJ2Q9NZG7 142 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 BCCIPQ9P287 314 aaKnown RBP eCLIP13.92□□□□□ -0.18
BEST1-208ENST00000534553 CACNG4Q9UBN1 327 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 NOVA2Q9UNW9 492 aaKnown RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 TDRD15B5MCY1 1934 aaKnown RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 A0A087WUV0 522 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 HACD1B0YJ81 288 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 H7C0C1 242 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 HOXA2O43364 376 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 ACSL3O95573 720 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 LTFP02788 710 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 SHBGP04278 402 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 ZSCAN5DPP0CG00 497 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 RPL22P35268 128 aaKnown RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 BRCC3P46736 316 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 ATP5OP48047 213 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 DEUP1Q05D60 604 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 SCAPQ12770 1279 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 CBLBQ13191 982 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 HIF1AQ16665 826 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 KCTD19Q17RG1 926 aaPredicted RBP13.92□□□□□ -0.18
BEST1-208ENST00000534553 ARL13BQ3SXY8 428 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 PM20D1Q6GTS8 502 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 CD300LGQ6UXG3 332 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 NAT8LQ8N9F0 302 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 ZMIZ2Q8NF64 920 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 CSPG4P5Q96PW8 444 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 RAD54BQ9Y620 910 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 TSC2P49815 1807 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 FRMPD3Q5JV73 1810 aa13.92□□□□□ -0.18
BEST1-208ENST00000534553 HHLA1C9JL84 531 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 M0QYT0 321 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 SYN3O14994 580 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 ALOX15BO15296 676 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 CHADO15335 359 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 PHBP35232 272 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 GDF10P55107 478 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 MAGOHP61326 146 aaKnown RBP13.91□□□□□ -0.18
BEST1-208ENST00000534553 KYNUQ16719 465 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 CA9Q16790 459 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 TNFAIP8L3Q5GJ75 292 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 RTN4RL1Q86UN2 441 aaPredicted RBP13.91□□□□□ -0.18
BEST1-208ENST00000534553 UNC45BQ8IWX7 931 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 FAM126BQ8IXS8 530 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 COLGALT2Q8IYK4 626 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 DCP1BQ8IZD4 617 aaKnown RBP13.91□□□□□ -0.18
BEST1-208ENST00000534553 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 PDIK1LQ8N165 341 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 FAM71DQ8N9W8 422 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 CPT1BQ92523 772 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
BEST1-208ENST00000534553 RAB6CQ9H0N0 254 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 GPATCH2LQ9NWQ4 482 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 MTMR10Q9NXD2 777 aa13.91□□□□□ -0.18
BEST1-208ENST00000534553 CDH16O75309 829 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 OAZ2O95190 189 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 ETS1P14921 441 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 TFE3P19532 575 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 IGFBP6P24592 240 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 MDH1P40925 334 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 IRAK1P51617 712 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 GNGT1P63211 74 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 RNASELQ05823 741 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 CCDC142Q17RM4 750 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 SLC45A4Q5BKX6 768 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 CLLU1OSQ5K130 101 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 PDZD4Q76G19 769 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 ZC3H18Q86VM9 953 aaKnown RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 FAM131BQ86XD5 332 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 SPATA2LQ8IUW3 424 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 CCDC185Q8N715 623 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 SEPT8Q92599 483 aa13.9□□□□□ -0.18
BEST1-208ENST00000534553 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
BEST1-208ENST00000534553 KLC2Q9H0B6 622 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms