RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 NDC80O14777 642 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 CSH1P0DML2 217 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 CSH2P0DML3 217 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 KCNJ11Q14654 390 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 NOMO1Q15155 1222 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 HSF5Q4G112 596 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-226ENST00000533820 BSPRYQ5W0U4 402 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 LRRC74BQ6ZQY2 392 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 CATSPERGQ6ZRH7 1159 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 NUDCD3Q8IVD9 361 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 TTC1Q99614 292 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 DDX50Q9BQ39 737 aaKnown RBP20.05■□□□□ 0.8
CAPN1-226ENST00000533820 RPF1Q9H9Y2 349 aaKnown RBP20.05■□□□□ 0.8
CAPN1-226ENST00000533820 TTLL3Q9Y4R7 772 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 BCAR1P56945 870 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 C16orf46Q6P387 395 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 SH2D5Q6ZV89 423 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 NDUFAF2Q8N183 169 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 RBM15BQ8NDT2 890 aaKnown RBP20.05■□□□□ 0.8
CAPN1-226ENST00000533820 E2F7Q96AV8 911 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 ASNSD1Q9NWL6 643 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 EFR3BQ9Y2G0 817 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 ASB3Q9Y575 518 aa20.05■□□□□ 0.8
CAPN1-226ENST00000533820 E7ENQ6 273 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 ABLIM1O14639 778 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 KRT37O76014 449 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 GMPRP36959 345 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 MRPS5P82675 430 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 SLC18A2Q05940 514 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 UBAP2LQ14157 1087 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 TTC39BQ5VTQ0 682 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 MAP1SQ66K74 1059 aaPredicted RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 MPZL3Q6UWV2 235 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 CFAP61Q8NHU2 1237 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 FGD4Q96M96 766 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 EBF4Q9BQW3 602 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 FETUBQ9UGM5 382 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 LACTBL1A8MY62 500 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 NOP56O00567 594 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 ARIH2O95376 493 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 PGK2P07205 417 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 SNRPAP09012 282 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 IQCF3P0C7M6 154 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 FUT4P22083 530 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 ANGEL2Q5VTE6 544 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 FAM160B1Q5W0V3 765 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 JADE1Q6IE81 842 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 USP29Q9HBJ7 922 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 DCAF8L1A6NGE4 600 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 CAPN15O75808 1086 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 USP1O94782 785 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 NPTXRO95502 500 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 RARBP10826 455 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 GPD1P21695 349 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 OSBPP22059 807 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 FAM183BPQ6ZVS7 135 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 CAND1Q86VP6 1230 aaKnown RBP20.04■□□□□ 0.8
CAPN1-226ENST00000533820 PLD5Q8N7P1 536 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 SMC1BQ8NDV3 1235 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 SEPT1Q8WYJ6 367 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 COPS5Q92905 334 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 TMEM176AQ96HP8 235 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 CPB2Q96IY4 423 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 MIS12Q9H081 205 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 CDT1Q9H211 546 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 ARHGEF4Q9NR80 690 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 STK32BQ9NY57 414 aa20.04■□□□□ 0.8
CAPN1-226ENST00000533820 GPR25O00155 361 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 SMAPO00193 183 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 LYPLA1O75608 230 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 UBTFL6P0CB48 400 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 STIP1P31948 543 aaKnown RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 SLC34A1Q06495 639 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 LRRC36Q1X8D7 754 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 CASC4Q6P4E1 433 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 CHSY1Q86X52 802 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 KBTBD2Q8IY47 623 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 PPP1R14CQ8TAE6 165 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 LHX5Q9H2C1 402 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 FAM49BQ9NUQ9 324 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 CNTN3Q9P232 1028 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 LMNAP02545 664 aaKnown RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 SP100P23497 879 aaPredicted RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 GPD2P43304 727 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 CD151P48509 253 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 ATXN1P54253 815 aaKnown RBP20.03■□□□□ 0.8
CAPN1-226ENST00000533820 TAZQ16635 292 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 SCUBE3Q8IX30 993 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 RNF157Q96PX1 679 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 NDNQ99608 321 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 APOL6Q9BWW8 343 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 PLAC1Q9HBJ0 212 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 IL1RAPL1Q9NZN1 696 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 PLLPQ9Y342 182 aa20.03■□□□□ 0.8
CAPN1-226ENST00000533820 ACADSP16219 412 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 TFE3P19532 575 aaPredicted RBP20.02■□□□□ 0.8
CAPN1-226ENST00000533820 TREML2Q5T2D2 321 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 IER5Q5VY09 327 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 DCAF15Q66K64 600 aa20.02■□□□□ 0.8
CAPN1-226ENST00000533820 CYP4V2Q6ZWL3 525 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms