RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 RFXAPO00287 272 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 PDXKO00764 312 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 NRP1O14786 923 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 GRM6O15303 877 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 NCK2O43639 380 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 EXTL3O43909 919 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 CXCL8P10145 99 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 PF4V1P10720 104 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 CYP3A5P20815 502 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 ADSSP30520 456 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 OR1G1P47890 313 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 LSSP48449 732 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 STK4Q13043 487 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 PNOCQ13519 176 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 STIM1Q13586 685 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 MYBPC2Q14324 1141 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 SURF1Q15526 300 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 COBLL1Q53SF7 1204 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 DCLRE1AQ6PJP8 1040 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 SEZ6L2Q6UXD5 910 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 ZC3H7AQ8IWR0 971 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 NELFCDQ8IXH7 590 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 GPD1LQ8N335 351 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 GUF1Q8N442 669 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 MAFAQ8NHW3 353 aaPredicted RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 USP33Q8TEY7 942 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 TMEM174Q8WUU8 243 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 RNF141Q8WVD5 230 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 POF1BQ8WVV4 589 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 HPS3Q969F9 1004 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 HAPLN2Q9GZV7 340 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 KCNF1Q9H3M0 494 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 NSUN3Q9H649 340 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 ALG13Q9NP73 1137 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 AGPAT3Q9NRZ7 376 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 SPTLC3Q9NUV7 552 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 MIOSQ9NXC5 875 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 UBQLN1Q9UMX0 589 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 SSX2IPQ9Y2D8 614 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 COQ6Q9Y2Z9 468 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 SF3B6Q9Y3B4 125 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 C2CD2Q9Y426 696 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 KIAA1671Q9BY89 1806 aa8.23□□□□□ -1.09
CASP4-212ENST00000533730 COL4A4P53420 1690 aaPredicted RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 TDRD15B5MCY1 1934 aaKnown RBP8.23□□□□□ -1.09
CASP4-212ENST00000533730 FAM95CA0A1B0GW59 222 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ZNF233A6NK53 670 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 LACTBL1A8MY62 500 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TISP43B9A030 160 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 NT5C1B-RDH14C9J2C7 533 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TMEM189-UBE2V1I3L0A0 370 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TGFB1I1O43294 461 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TRAPPC3O43617 180 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 CALUO43852 315 aaPredicted RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 B4GALT3O60512 393 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 NFICP08651 508 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 NAT1P18440 290 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ITIH2P19823 946 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 HOXD13P35453 343 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 GRIK1P39086 918 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 PBX3P40426 434 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TNFSF9P41273 254 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ACOT2P49753 483 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 CREMQ03060 361 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 SMC1AQ14683 1233 aaKnown RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 TMEM132DQ14C87 1099 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 PCBP2Q15366 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
CASP4-212ENST00000533730 NAB2Q15742 525 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 GLRA4Q5JXX5 417 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 PRSS36Q5K4E3 855 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ZNF658Q5TYW1 1059 aaPredicted RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 PDXDC1Q6P996 788 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 BRSK2Q8IWQ3 736 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 VPS52Q8N1B4 723 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TRIML1Q8N9V2 468 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 XXYLT1Q8NBI6 393 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 BEST2Q8NFU1 509 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 CACTINQ8WUQ7 758 aaKnown RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 CHTF18Q8WVB6 975 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 AHCYL2Q96HN2 611 aaKnown RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 CDCA3Q99618 268 aaPredicted RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 CBWD1Q9BRT8 395 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 FAM213AQ9BRX8 229 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 MCMBPQ9BTE3 642 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 SLC13A1Q9BZW2 595 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TCF7L1Q9HCS4 588 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ENTPD7Q9NQZ7 604 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 LMBRD1Q9NUN5 540 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 RBAKQ9NYW8 714 aaPredicted RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 HSPBP1Q9NZL4 362 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ADAM28Q9UKQ2 775 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 TRAF3IP3Q9Y228 551 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
CASP4-212ENST00000533730 PRG3Q9Y2Y8 225 aaPredicted RBP8.22□□□□□ -1.09
CASP4-212ENST00000533730 SF3B1O75533 1304 aaKnown RBP eCLIP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms