RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 BRD2P25440 801 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 GBP1P32455 592 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 EIF2DP41214 584 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 RGS7P49802 495 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 YWHAGP61981 247 aaKnown RBP eCLIP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 MRPS21P82921 87 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 LMNB2Q03252 620 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 BST2Q10589 180 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 CCDC6Q16204 474 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 GRAMD4Q6IC98 578 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 HTR3DQ70Z44 454 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 CACNA2D4Q7Z3S7 1137 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 ARHGEF19Q8IW93 802 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 TRIM59Q8IWR1 403 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 SIX6OS1Q8N1H7 587 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 ARHGAP18Q8N392 663 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 UBR7Q8N806 425 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 TRIML1Q8N9V2 468 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 RBBP8NLQ8NC74 664 aaPredicted RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 CDK5RAP1Q96SZ6 601 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 INTS2Q9H0H0 1204 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 MARCH2Q9P0N8 246 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 MMP17Q9ULZ9 603 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.65
CAPN1-225ENST00000533704 USP3Q9Y6I4 520 aa10.96□□□□□ -0.65
CAPN1-225ENST00000533704 FRYLO94915 3013 aa10.96□□□□□ -0.66
CAPN1-225ENST00000533704 CCDC163A0A0D9SF12 145 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 SLC12A8A0AV02 714 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 M0QYV0 167 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 SGK1O00141 431 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 O00370 1275 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 GREM1O60565 184 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 FGFR1OPO95684 399 aaKnown RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 ZBED1O96006 694 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 KRT5P13647 590 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 TYRP14679 529 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 CORO1AP31146 461 aaKnown RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 PI4KAP42356 2102 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 WASP42768 502 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 TNFRSF4P43489 277 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 TPD52L1Q16890 204 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 PREPLQ4J6C6 727 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 RAB41Q5JT25 222 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 EOGTQ5NDL2 527 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 KLHDC10Q6PID8 442 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 NUDT18Q6ZVK8 323 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 ETFBKMTQ8IXQ9 262 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 PGBD3Q8N328 593 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 PHTF2Q8N3S3 785 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 IL17RCQ8NAC3 791 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 TFAP2BQ92481 460 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 EDEM1Q92611 657 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 ERLEC1Q96DZ1 483 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 XPO6Q96QU8 1125 aaKnown RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 UBXN6Q9BZV1 441 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 ARRDC1-AS1Q9H2J1 176 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 SEMA4GQ9NTN9 838 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 PLK2Q9NYY3 685 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 BCCIPQ9P287 314 aaKnown RBP eCLIP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 WDR35Q9P2L0 1181 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
CAPN1-225ENST00000533704 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
CAPN1-225ENST00000533704 RNF225M0QZC1 329 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 P4HA2O15460 535 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 ALDH1A2O94788 518 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 PAEPP09466 180 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 SETSIPP0DME0 302 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 HNRNPLP14866 589 aaKnown RBP eCLIP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 KIR2DL1P43626 348 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 COG7P83436 770 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 PUM1Q14671 1186 aaKnown RBP eCLIP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 ELF2Q15723 593 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 CRY1Q16526 586 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 USP39Q53GS9 565 aaKnown RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 FOXR2Q6PJQ5 311 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 LCLAT1Q6UWP7 414 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 TMEM92Q6UXU6 159 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 Q6ZNB5 142 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 DGLUCYQ7Z3D6 616 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 DENND1CQ8IV53 801 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 FMNL3Q8IVF7 1028 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 ZNF513Q8N8E2 541 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 TERB1Q8NA31 727 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 LMO3Q8TAP4 145 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 RNF139Q8WU17 664 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 HMGB4Q8WW32 186 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 CNOT6LQ96LI5 555 aaKnown RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 CRACR2AQ9BSW2 395 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 DCLK3Q9C098 648 aa10.94□□□□□ -0.66
CAPN1-225ENST00000533704 UBE2TQ9NPD8 197 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-225ENST00000533704 RWDD2AQ9UIY3 292 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms