RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 MMP17Q9ULZ9 603 aa23.37■■□□□ 1.33
BEST1-207ENST00000533521 SCAMP3O14828 347 aaKnown RBP23.36■■□□□ 1.33
BEST1-207ENST00000533521 APBB3O95704 486 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 RETP07949 1114 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 IRF1P10914 325 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 SLC6A11P48066 632 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 RRAGAQ7L523 313 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 C12orf40Q86WS4 652 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 ARHGEF19Q8IW93 802 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 RBBP8NLQ8NC74 664 aaPredicted RBP23.36■■□□□ 1.33
BEST1-207ENST00000533521 IRGQQ8WZA9 623 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 KAT5Q92993 513 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 LOXL4Q96JB6 756 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 KREMEN1Q96MU8 473 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 IPO9Q96P70 1041 aaKnown RBP23.36■■□□□ 1.33
BEST1-207ENST00000533521 NUP62CLQ9H1M0 184 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 THAP9Q9H5L6 903 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 MARCH2Q9P0N8 246 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 STARD13Q9Y3M8 1113 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 EML5Q05BV3 1969 aa23.36■■□□□ 1.33
BEST1-207ENST00000533521 TULP2O00295 520 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 TULP3O75386 442 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 CHKAP35790 457 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 KIR2DL1P43626 348 aaPredicted RBP23.35■■□□□ 1.33
BEST1-207ENST00000533521 HEATR6Q6AI08 1181 aaKnown RBP23.35■■□□□ 1.33
BEST1-207ENST00000533521 FAM114A1Q8IWE2 563 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 SIX6OS1Q8N1H7 587 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 XPO6Q96QU8 1125 aaKnown RBP23.35■■□□□ 1.33
BEST1-207ENST00000533521 HINFPQ9BQA5 517 aa23.35■■□□□ 1.33
BEST1-207ENST00000533521 MYO18AQ92614 2054 aaKnown RBP23.35■■□□□ 1.33
BEST1-207ENST00000533521 AXIN1O15169 862 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 RPL34P49207 117 aaKnown RBP23.34■■□□□ 1.33
BEST1-207ENST00000533521 DGKEP52429 567 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 MFAP3P55082 362 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 ADIGQ0VDE8 80 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 ANO4Q32M45 955 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 TRIM65Q6PJ69 517 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 GBP6Q6ZN66 633 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 RSRC2Q7L4I2 434 aaKnown RBP23.34■■□□□ 1.33
BEST1-207ENST00000533521 MIB1Q86YT6 1006 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 TERB1Q8NA31 727 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 UBA3Q8TBC4 463 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 PLD4Q96BZ4 506 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 ZC3H10Q96K80 434 aaKnown RBP23.34■■□□□ 1.33
BEST1-207ENST00000533521 ZSWIM1Q9BR11 485 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 ABCC13Q9NSE7 274 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 FBXO10Q9UK96 956 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 NUDT5Q9UKK9 219 aa23.34■■□□□ 1.33
BEST1-207ENST00000533521 HBS1LQ9Y450 684 aaKnown RBP23.34■■□□□ 1.33
BEST1-207ENST00000533521 MDM4O15151 490 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 FOXD2O60548 495 aaPredicted RBP23.33■■□□□ 1.33
BEST1-207ENST00000533521 FBXO21O94952 628 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 KLKB1P03952 638 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 DAOAP59103 153 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 EFEMP1Q12805 493 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 TRIP4Q15650 581 aaPredicted RBP23.33■■□□□ 1.33
BEST1-207ENST00000533521 C2orf27AQ580R0 203 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 BSPRYQ5W0U4 402 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 TRMT11Q7Z4G4 463 aaKnown RBP23.33■■□□□ 1.33
BEST1-207ENST00000533521 RASSF3Q86WH2 238 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 FAM217AQ8IXS0 508 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 CPXM2Q8N436 756 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 DCLK2Q8N568 766 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 STK32AQ8WU08 396 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 BBS2Q9BXC9 721 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 UBE2TQ9NPD8 197 aaPredicted RBP23.33■■□□□ 1.33
BEST1-207ENST00000533521 RASAL2Q9UJF2 1139 aa23.33■■□□□ 1.33
BEST1-207ENST00000533521 MED7O43513 233 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 RPP40O75818 363 aaKnown RBP23.32■■□□□ 1.32
BEST1-207ENST00000533521 TYRP14679 529 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 TGM1P22735 817 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 MESP2Q0VG99 397 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 CRY1Q16526 586 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 EOGTQ5NDL2 527 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 PMF1Q6P1K2 205 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 MSANTD2Q6P1R3 559 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 PRR23BQ6ZRT6 265 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 CEP68Q76N32 757 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 CACNA2D4Q7Z3S7 1137 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 C11orf74Q86VG3 221 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 IL17RCQ8NAC3 791 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 RNF139Q8WU17 664 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 GBP4Q96PP9 640 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 IRX2Q9BZI1 471 aaPredicted RBP23.32■■□□□ 1.32
BEST1-207ENST00000533521 APEX2Q9UBZ4 518 aa23.32■■□□□ 1.32
BEST1-207ENST00000533521 TBC1D3BA6NDS4 549 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 YJEFN3A6XGL0 299 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 E7ENQ6 273 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 M0QYV0 167 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 LATS1O95835 1130 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 PENKP01210 267 aaPredicted RBP23.31■■□□□ 1.32
BEST1-207ENST00000533521 SDHBP21912 280 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 BRD2P25440 801 aaKnown RBP23.31■■□□□ 1.32
BEST1-207ENST00000533521 ZNF445P59923 1031 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 MAN2A1Q16706 1144 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 TPD52L1Q16890 204 aaPredicted RBP23.31■■□□□ 1.32
BEST1-207ENST00000533521 EXOC3L4Q17RC7 722 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 DPCR1Q3MIW9 517 aa23.31■■□□□ 1.32
BEST1-207ENST00000533521 GRAMD4Q6IC98 578 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms