RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NR1H3Q13133 447 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 DHCR24Q15392 516 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 TMEM196Q5HYL7 178 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 RHBDF2Q6PJF5 856 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 Q6ZNB5 142 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 MIB1Q86YT6 1006 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 CHRDQ9H2X0 955 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 RASAL2Q9UJF2 1139 aa21.42■■□□□ 1.02
CCS-208ENST00000533244 CAVIN2O95810 425 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 CYP11B1P15538 503 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 COG7P83436 770 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 NAIF1Q69YI7 327 aaPredicted RBP21.41■■□□□ 1.02
CCS-208ENST00000533244 MSANTD2Q6P1R3 559 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 RSRC2Q7L4I2 434 aaKnown RBP21.41■■□□□ 1.02
CCS-208ENST00000533244 DDX1Q92499 740 aaKnown RBP21.41■■□□□ 1.02
CCS-208ENST00000533244 IER2Q9BTL4 223 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 MIS12Q9H081 205 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 LMAN1LQ9HAT1 526 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 RTN4Q9NQC3 1192 aaKnown RBP21.41■■□□□ 1.02
CCS-208ENST00000533244 ST7Q9NRC1 585 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 MARCH2Q9P0N8 246 aa21.41■■□□□ 1.02
CCS-208ENST00000533244 LSM7Q9UK45 103 aaKnown RBP21.41■■□□□ 1.02
CCS-208ENST00000533244 E5RJQ4 531 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 PAPSS1O43252 624 aaPredicted RBP21.4■■□□□ 1.02
CCS-208ENST00000533244 SART1O43290 800 aaKnown RBP21.4■■□□□ 1.02
CCS-208ENST00000533244 LTFP02788 710 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 OPRD1P41143 372 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 LRRC32Q14392 662 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 DGKKQ5KSL6 1271 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 FSTL4Q6MZW2 842 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 MAMSTRQ6ZN01 415 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 PASD1Q8IV76 773 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 SCUBE3Q8IX30 993 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 EPS8L1Q8TE68 723 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 EDEM1Q92611 657 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 FBRSL1Q9HCM7 1045 aaKnown RBP21.4■■□□□ 1.02
CCS-208ENST00000533244 STRIP2Q9ULQ0 834 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 CACNA1IQ9P0X4 2223 aa21.4■■□□□ 1.02
CCS-208ENST00000533244 TEX33O43247 280 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 ADH1CP00326 375 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 KLKB1P03952 638 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 FYNP06241 537 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 CDH5P33151 784 aaPredicted RBP21.39■■□□□ 1.02
CCS-208ENST00000533244 KRT9P35527 623 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 GALK1P51570 392 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 LY6G5CQ5SRR4 150 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 BEND5Q7L4P6 421 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 C1orf210Q8IVY1 113 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 SYNPOQ8N3V7 929 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 NEK11Q8NG66 645 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 RNF139Q8WU17 664 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 CPXM1Q96SM3 734 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 P2RY13Q9BPV8 354 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 NLRC4Q9NPP4 1024 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 TJP2Q9UDY2 1190 aa21.39■■□□□ 1.02
CCS-208ENST00000533244 A0A1B0GTH6 734 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 HOXC11O43248 304 aaPredicted RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 SOX5P35711 763 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 GAS6Q14393 721 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 ANGPT1Q15389 498 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 TRIP4Q15650 581 aaPredicted RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 NOP9Q86U38 636 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 LUZP1Q86V48 1076 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 MAML2Q8IZL2 1156 aaPredicted RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 CD101Q93033 1021 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 SPHK2Q9NRA0 654 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 RBM12Q9NTZ6 932 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 NOCTQ9UK39 431 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 HBS1LQ9Y450 684 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 MYOFQ9NZM1 2061 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 SLC12A8A0AV02 714 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 ADH5P11766 374 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 DRD1P21728 446 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 EIF2DP41214 584 aaKnown RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 GRSF1Q12849 480 aaKnown RBP eCLIP21.38■■□□□ 1.01
CCS-208ENST00000533244 MTAPQ13126 283 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 FMNL3Q8IVF7 1028 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 EZH1Q92800 747 aaPredicted RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 GOLGA1Q92805 767 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 EXOC4Q96A65 974 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 PLD4Q96BZ4 506 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 PPP1R13BQ96KQ4 1090 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 PCMTD1Q96MG8 357 aaPredicted RBP21.38■■□□□ 1.01
CCS-208ENST00000533244 DCLK3Q9C098 648 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 IRF2BPLQ9H1B7 796 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 MARK1Q9P0L2 795 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 SFMBT1Q9UHJ3 866 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 ZNF510Q9Y2H8 683 aa21.38■■□□□ 1.01
CCS-208ENST00000533244 KIAA1549LQ6ZVL6 1849 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 H0Y858 1186 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 GFPT2O94808 682 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 CORO1AP31146 461 aaKnown RBP21.37■■□□□ 1.01
CCS-208ENST00000533244 GAD2Q05329 585 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 NFKBIBQ15653 356 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 PTPN20Q4JDL3 420 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 Q6ZS52 159 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 ZNF677Q86XU0 584 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 TMEM25Q86YD3 366 aa21.37■■□□□ 1.01
CCS-208ENST00000533244 ETFBKMTQ8IXQ9 262 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms